ROOT crash running a working MACRO

ottavio_fornieri · March 23, 2017, 1:07pm

Good morning,
I am having some trouble with a rather big text file:

8600000 rows

I have written a macro which seems to work fine and I know that because if I extract 200000 lines from text file 1 I get what I need; if instead I insert the whole text file, session crashes.
It gets still tougher because when I last tried to run the same macro with the same text file, a couple of weeks ago, it worked.
Beside, if I run, today, another macro with the same whole text file, it works.
I tried to empty cache memory and still nothing.

Do you recognize anything wrong?

couet · March 23, 2017, 1:15pm

It looks like with the complete file you exceed memory … can you provide a small example showing what you are doing ?

ottavio_fornieri · March 23, 2017, 1:21pm

Sure!
In attachment you will find the first part of my MACRO. I can read the output of the last “cout” command, but, if I ask another print out the line after this, I do not read it.
Even if I do not ask for another print out, this is where it crashes.

couet · March 23, 2017, 1:38pm

According to the number of rows (8600000) in your file and the number of columns (12)
It seems that you have 6,6 GB of data. Does you computer have enough memory ?

ottavio_fornieri · March 23, 2017, 1:42pm

Yes it does. Plus, if I run another MACRO using the same textfile, it works perfectly.

couet · March 23, 2017, 1:51pm

If the reading is the done same way in the two macros, it means the problem is elsewhere. You said it crashes; Can we see the trace back you get ?

ottavio_fornieri · March 23, 2017, 1:56pm

Process:               root.exe [727]
Path:                  /Users/USER/*/root.exe
Identifier:            root.exe
Version:               0
Code Type:             X86-64 (Native)
Parent Process:        root [726]
Responsible:           Terminal [342]
User ID:               501

Date/Time:             2017-03-23 14:43:45.926 +0100
OS Version:            Mac OS X 10.10.5 (14F2109)
Report Version:        11
Anonymous UUID:        DBB3ABCB-3415-F171-8DAC-A0776793D94A


Time Awake Since Boot: 3300 seconds

Crashed Thread:        0  Dispatch queue: com.apple.main-thread

Exception Type:        EXC_BAD_ACCESS (SIGSEGV)
Exception Codes:       KERN_PROTECTION_FAILURE at 0x00007fff5cd75428

VM Regions Near 0x7fff5cd75428:
    MALLOC_SMALL           00007fa525800000-00007fa526000000 [ 8192K] rw-/rwx SM=COW  
--> STACK GUARD            00007fff59cbb000-00007fff5d4bb000 [ 56.0M] ---/rwx SM=NUL  stack guard for thread 0
    Stack                  00007fff5d4bb000-00007fff5dcbb000 [ 8192K] rw-/rwx SM=COW  thread 0

Thread 0 Crashed:: Dispatch queue: com.apple.main-thread
0   Spettro_muoni_da_tutte_le_origini_separatamente_C.so	0x000000010c8a8d3b spettro() + 2107
1   ???                           	0x000000010f2c5047 0 + 4549529671
2   libCling.so                   	0x00000001024889fb cling::Interpreter::RunFunction(clang::FunctionDecl const*, cling::Value*) + 315
3   libCling.so                   	0x0000000102487e89 cling::Interpreter::EvaluateInternal(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&, cling::CompilationOptions, cling::Value*, cling::Transaction**) + 361
4   libCling.so                   	0x0000000102487854 cling::Interpreter::process(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&, cling::Value*, cling::Transaction**) + 100
5   libCling.so                   	0x00000001024c1def cling::MetaProcessor::process(char const*, cling::Interpreter::CompilationResult&, cling::Value*) + 415
6   libCling.so                   	0x00000001023801ea TCling::ProcessLine(char const*, TInterpreter::EErrorCode*) + 3690
7   libRint.so                    	0x00000001022ecb03 TRint::ProcessLineNr(char const*, char const*, int*) + 211
8   libRint.so                    	0x00000001022ed64f TRint::HandleTermInput() + 671
9   libCore.so                    	0x00000001020a1528 TUnixSystem::CheckDescriptors() + 328
10  libCore.so                    	0x00000001020aa31d TMacOSXSystem::DispatchOneEvent(bool) + 429
11  libCore.so                    	0x000000010201fc6a TSystem::InnerLoop() + 26
12  libCore.so                    	0x000000010201fabb TSystem::Run() + 203
13  libCore.so                    	0x0000000101fbd084 TApplication::Run(bool) + 36
14  libRint.so                    	0x00000001022ec9bc TRint::Run(bool) + 1372
15  root.exe                      	0x0000000101f45e8f main + 79
16  libdyld.dylib                 	0x00007fff9600c5c9 start + 1

Thread 1:: Dispatch queue: com.apple.libdispatch-manager
0   libsystem_kernel.dylib        	0x00007fff8c0b8232 kevent64 + 10
1   libdispatch.dylib             	0x00007fff9420d26e _dispatch_mgr_thread + 52

Thread 2:
0   libsystem_kernel.dylib        	0x00007fff8c0b24de mach_msg_trap + 10
1   libsystem_kernel.dylib        	0x00007fff8c0b164f mach_msg + 55
2   com.apple.CoreFoundation      	0x00007fff96e1eeb4 __CFRunLoopServiceMachPort + 212
3   com.apple.CoreFoundation      	0x00007fff96e1e37b __CFRunLoopRun + 1371
4   com.apple.CoreFoundation      	0x00007fff96e1dbd8 CFRunLoopRunSpecific + 296
5   com.apple.AppKit              	0x00007fff9851456b _NSEventThread + 137
6   libsystem_pthread.dylib       	0x00007fff9a8c505a _pthread_body + 131
7   libsystem_pthread.dylib       	0x00007fff9a8c4fd7 _pthread_start + 176
8   libsystem_pthread.dylib       	0x00007fff9a8c23ed thread_start + 13

Thread 0 crashed with X86 Thread State (64-bit):
  rax: 0x0000000000f42400  rbx: 0x00007fff7e22f2f8  rcx: 0x00007fff5cd75430  rdx: 0x0000000000000021
  rdi: 0x00007fff7e22f2f8  rsi: 0x000000010c8ab8c3  rbp: 0x00007fff5dcb7d00  rsp: 0x00007fff5cd75430
   r8: 0x00007fff5dcb7760   r9: 0x00007fff7e049300  r10: 0x000000000000000a  r11: 0x0000000000000246
  r12: 0x00000000001e8480  r13: 0x00007fff5dcb7890  r14: 0x00007fff5dcb7888  r15: 0x000000000000000a
  rip: 0x000000010c8a8d3b  rfl: 0x0000000000010206  cr2: 0x00007fff5cd75428
  
Logical CPU:     0
Error Code:      0x00000006
Trap Number:     14


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ottavio_fornieri · March 23, 2017, 1:57pm

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    0x7fff9643f000 -     0x7fff96770fff  com.apple.Foundation (6.9 - 1154) <49EE64E1-9F53-35D1-A481-2EFE2789B254> /System/Library/Frameworks/Foundation.framework/Versions/C/Foundation
    0x7fff96853000 -     0x7fff9685bffb  libcopyfile.dylib (118.1.2) <0C68D3A6-ACDD-3EF3-991A-CC82C32AB836> /usr/lib/system/libcopyfile.dylib
    0x7fff9685c000 -     0x7fff9686bfff  com.apple.LangAnalysis (1.7.0 - 1.7.0) <D1E527E4-C561-352F-9457-E8C50232793C> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/LangAnalysis.framework/Versions/A/LangAnalysis
    0x7fff9686c000 -     0x7fff96983fe7  libvDSP.dylib (516) <DFEDB210-49D1-3803-88A2-C61DB6A45C3D> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libvDSP.dylib
    0x7fff9698f000 -     0x7fff969bcfff  com.apple.CoreVideo (1.8 - 145.1) <18DB07E0-B927-3260-A234-636F298D1917> /System/Library/Frameworks/CoreVideo.framework/Versions/A/CoreVideo
    0x7fff96afe000 -     0x7fff96b1afff  com.apple.GenerationalStorage (2.0 - 209.11) <9FF8DD11-25FB-3047-A5BF-9415339B3EEC> /System/Library/PrivateFrameworks/GenerationalStorage.framework/Versions/A/GenerationalStorage
    0x7fff96d61000 -     0x7fff96dabfff  com.apple.HIServices (1.22 - 523) <99ADA325-53C8-368E-A5FA-3F913CD2245A> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/HIServices.framework/Versions/A/HIServices
    0x7fff96dac000 -     0x7fff97144ff7  com.apple.CoreFoundation (6.9 - 1153.18) <5C0892B8-9691-341F-9279-CA3A74D59AA0> /System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation
    0x7fff97178000 -     0x7fff971a0fff  libxpc.dylib (559.40.1) <5C829202-962E-3744-8B50-00D38CC88E84> /usr/lib/system/libxpc.dylib
    0x7fff971a1000 -     0x7fff975d1fff  com.apple.vision.FaceCore (3.1.6 - 3.1.6) <C3B823AA-C261-37D3-B4AC-C59CE91C8241> /System/Library/PrivateFrameworks/FaceCore.framework/Versions/A/FaceCore
    0x7fff975e9000 -     0x7fff97643ff7  com.apple.LanguageModeling (1.0 - 1) <ACA93FE0-A0E3-333E-AE3C-8EB7DE5F362F> /System/Library/PrivateFrameworks/LanguageModeling.framework/Versions/A/LanguageModeling
    0x7fff97e5e000 -     0x7fff97e6bff7  libbz2.1.0.dylib (36) <2DF83FBC-5C08-39E1-94F5-C28653791B5F> /usr/lib/libbz2.1.0.dylib
    0x7fff97e98000 -     0x7fff97e99fff  com.apple.TrustEvaluationAgent (2.0 - 25) <2D61A2C3-C83E-3A3F-8EC1-736DBEC250AB> /System/Library/PrivateFrameworks/TrustEvaluationAgent.framework/Versions/A/TrustEvaluationAgent
    0x7fff97e9a000 -     0x7fff97ea2fff  libsystem_dnssd.dylib (576.50.2) <9EC5AF92-D0D2-3BDE-92B6-D3730D3865C8> /usr/lib/system/libsystem_dnssd.dylib
    0x7fff97ea3000 -     0x7fff97ea3fff  com.apple.Accelerate (1.10 - Accelerate 1.10) <F1B96A61-7E4B-31BD-A35B-BA7EF1F16EF4> /System/Library/Frameworks/Accelerate.framework/Versions/A/Accelerate
    0x7fff97ea4000 -     0x7fff982f7fc7  com.apple.vImage (8.0 - 8.0) <33BE7B31-72DB-3364-B37E-C322A32748C5> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vImage.framework/Versions/A/vImage
    0x7fff983bb000 -     0x7fff98f3cff7  com.apple.AppKit (6.9 - 1348.17) <E485D56D-3E72-34B7-99BB-BFDEE2D07BF5> /System/Library/Frameworks/AppKit.framework/Versions/C/AppKit
    0x7fff998d3000 -     0x7fff998edff3  com.apple.Ubiquity (1.3 - 313) <DF56A657-CC6E-3BE2-86A0-71F07127724C> /System/Library/PrivateFrameworks/Ubiquity.framework/Versions/A/Ubiquity
    0x7fff998ee000 -     0x7fff9a151fff  com.apple.CoreGraphics (1.600.0 - 788.3.6) <6C73EE2E-7731-3157-A231-BE510CF620CE> /System/Library/Frameworks/CoreGraphics.framework/Versions/A/CoreGraphics
    0x7fff9a152000 -     0x7fff9a193fff  libGLU.dylib (11.1.6) <4BC6579D-A6D0-3A19-880E-E29FAEA698E7> /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib
    0x7fff9a231000 -     0x7fff9a29dfff  com.apple.framework.CoreWLAN (5.0 - 500.35.2) <03697149-1CDD-32FF-B564-1C1EF5E9E5C3> /System/Library/Frameworks/CoreWLAN.framework/Versions/A/CoreWLAN
    0x7fff9a329000 -     0x7fff9a349ff7  com.apple.MultitouchSupport.framework (264.6 - 264.6) <1539F1F6-6334-37F3-9C52-02EFFBF4835D> /System/Library/PrivateFrameworks/MultitouchSupport.framework/Versions/A/MultitouchSupport
    0x7fff9a3b0000 -     0x7fff9a3e0ff3  com.apple.GSS (4.0 - 2.0) <97F2A028-44CF-3188-B863-F4EEB39CBDBD> /System/Library/Frameworks/GSS.framework/Versions/A/GSS
    0x7fff9a3e2000 -     0x7fff9a4fbffb  com.apple.CoreText (454.11 - 454.11) <7E5228C8-8657-3B6C-B3A4-98B79A3041EA> /System/Library/Frameworks/CoreText.framework/Versions/A/CoreText
    0x7fff9a4fc000 -     0x7fff9a4fdff7  libsystem_blocks.dylib (65) <9615D10A-FCA7-3BE4-AA1A-1B195DACE1A1> /usr/lib/system/libsystem_blocks.dylib
    0x7fff9a4fe000 -     0x7fff9a831ff7  libmecabra.dylib (666.7) <0ED8AE5E-7A5B-34A6-A2EE-2B852E60E1E2> /usr/lib/libmecabra.dylib
    0x7fff9a861000 -     0x7fff9a8c0fff  com.apple.AE (681.5 - 681.7) <2BF39455-1CDD-392C-824A-9972C6B1FB57> /System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/AE.framework/Versions/A/AE
    0x7fff9a8c1000 -     0x7fff9a8cafff  libsystem_pthread.dylib (105.40.1) <ACE90967-ECD0-3251-AEEB-461E3C6414F7> /usr/lib/system/libsystem_pthread.dylib
    0x7fff9a8cb000 -     0x7fff9a961ff7  com.apple.cloudkit.CloudKit (283.67.4 - 283.67.4) <EA6E4B2C-A3AA-3636-B9C3-F61D3EFFB82B> /System/Library/Frameworks/CloudKit.framework/Versions/A/CloudKit
    0x7fff9a995000 -     0x7fff9a9e1ff7  libcups.2.dylib (408.2) <E8AD18F9-61E4-3791-B840-504468C25556> /usr/lib/libcups.2.dylib
    0x7fff9a9f3000 -     0x7fff9aa10ffb  libresolv.9.dylib (57) <26B38E61-298A-3C3A-82C1-3B5E98AD5E29> /usr/lib/libresolv.9.dylib
    0x7fff9aa1c000 -     0x7fff9aa8dffb  com.apple.ApplicationServices.ATS (360 - 375.4) <888FE0B1-835C-30B1-80AD-5066CADB0364> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ATS.framework/Versions/A/ATS
    0x7fff9aa96000 -     0x7fff9ab08fff  com.apple.framework.IOKit (2.0.2 - 1050.20.2) <09C0518C-90DF-3FC3-96D6-34D35F72C8EF> /System/Library/Frameworks/IOKit.framework/Versions/A/IOKit
    0x7fff9ab09000 -     0x7fff9ad19ff7  com.apple.CFNetwork (720.5.7 - 720.5.7) <A47D7DD2-5903-39D0-8D27-5A7E2D119D84> /System/Library/Frameworks/CFNetwork.framework/Versions/A/CFNetwork
    0x7fff9ae03000 -     0x7fff9ae0eff7  libcsfde.dylib (471.30.1) <A62AE3D8-E2A6-314A-BF45-804003BE0AC9> /usr/lib/libcsfde.dylib
    0x7fff9ae6c000 -     0x7fff9ae6eff7  libsystem_coreservices.dylib (9) <41B7C578-5A53-31C8-A96F-C73E030B0938> /usr/lib/system/libsystem_coreservices.dylib
    0x7fff9afb4000 -     0x7fff9afbcfe7  libcldcpuengine.dylib (2.4.5) <CC1C07D1-21E0-36FA-87DA-351B7A8B17F9> /System/Library/Frameworks/OpenCL.framework/Versions/A/Libraries/libcldcpuengine.dylib
    0x7fff9afbd000 -     0x7fff9afc0fff  com.apple.IOSurface (97.4 - 97.4) <AE11CFBC-4D46-30F3-BEEC-4C8131079391> /System/Library/Frameworks/IOSurface.framework/Versions/A/IOSurface
    0x7fff9afc5000 -     0x7fff9afcefff  libGFXShared.dylib (11.1.6) <CB24B5DA-CB17-3A0B-94E1-5A58DADC3FBD> /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGFXShared.dylib
    0x7fff9afcf000 -     0x7fff9b0fffff  com.apple.UIFoundation (1.0 - 1) <466BDFA8-0B9F-3AB0-989D-F9779422926A> /System/Library/PrivateFrameworks/UIFoundation.framework/Versions/A/UIFoundation
    0x7fff9b100000 -     0x7fff9b13affb  com.apple.DebugSymbols (115 - 115) <6F03761D-7C3A-3C80-8031-AA1C1AD7C706> /System/Library/PrivateFrameworks/DebugSymbols.framework/Versions/A/DebugSymbols
    0x7fff9b1cb000 -     0x7fff9b1f4ff3  libxslt.1.dylib (13.12) <19B2D915-DC29-3F79-9756-D7EB9051FEFF> /usr/lib/libxslt.1.dylib
    0x7fff9b1f5000 -     0x7fff9b1f7fff  libsystem_sandbox.dylib (358.20.5) <3F5E973F-C702-31AC-97BC-05F5C195683C> /usr/lib/system/libsystem_sandbox.dylib
    0x7fff9b20b000 -     0x7fff9b25ffff  libc++.1.dylib (120) <1B9530FD-989B-3174-BB1C-BDC159501710> /usr/lib/libc++.1.dylib
    0x7fff9b260000 -     0x7fff9b261ffb  libremovefile.dylib (35) <3485B5F4-6CE8-3C62-8DFD-8736ED6E8531> /usr/lib/system/libremovefile.dylib
    0x7fff9b3d5000 -     0x7fff9b3e2ff3  com.apple.ProtocolBuffer (1 - 228.0.1) <3429EB06-9F0E-355F-B9AB-F72879177398> /System/Library/PrivateFrameworks/ProtocolBuffer.framework/Versions/A/ProtocolBuffer
    0x7fff9b3ec000 -     0x7fff9b424fff  com.apple.RemoteViewServices (2.0 - 99) <C9A62691-B0D9-34B7-B71C-A48B5F4DC553> /System/Library/PrivateFrameworks/RemoteViewServices.framework/Versions/A/RemoteViewServices
    0x7fff9b427000 -     0x7fff9b429fff  libCVMSPluginSupport.dylib (11.1.6) <F82BF8C4-12D3-3EAD-AEDE-533AC08AEB4A> /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCVMSPluginSupport.dylib
    0x7fff9b4e1000 -     0x7fff9b4edff7  com.apple.OpenDirectory (10.10 - 187) <22FF4721-03D8-381B-AA83-2B07D690C777> /System/Library/Frameworks/OpenDirectory.framework/Versions/A/OpenDirectory
    0x7fff9b6bc000 -     0x7fff9b8b646f  libobjc.A.dylib (647) <759E155D-BC42-3D4E-869B-6F57D477177C> /usr/lib/libobjc.A.dylib
    0x7fff9b8b7000 -     0x7fff9b8bcfff  libsystem_stats.dylib (163.30.2) <CDB327EF-3C80-362F-9BF6-718CBBC5DB24> /usr/lib/system/libsystem_stats.dylib
    0x7fff9b8ea000 -     0x7fff9b8eaff7  liblaunch.dylib (559.40.1) <4F81CA3A-D2CE-3030-A89D-42F3DAD7BA8F> /usr/lib/system/liblaunch.dylib
    0x7fff9ba56000 -     0x7fff9ba56ff7  libkeymgr.dylib (28) <77845842-DE70-3CC5-BD01-C3D14227CED5> /usr/lib/system/libkeymgr.dylib

External Modification Summary:
  Calls made by other processes targeting this process:
    task_for_pid: 2
    thread_create: 0
    thread_set_state: 0
  Calls made by this process:
    task_for_pid: 0
    thread_create: 0
    thread_set_state: 0
  Calls made by all processes on this machine:
    task_for_pid: 1197
    thread_create: 0
    thread_set_state: 0

VM Region Summary:
ReadOnly portion of Libraries: Total=236.3M resident=215.3M(91%) swapped_out_or_unallocated=20.9M(9%)
Writable regions: Total=406.0M written=321.8M(79%) resident=343.8M(85%) swapped_out=0K(0%) unallocated=62.2M(15%)
 
REGION TYPE                      VIRTUAL
===========                      =======
CG backing stores                  1660K
CG image                             92K
CG shared images                    240K
CoreAnimation                        12K
CoreImage                             8K
CoreUI image data                    48K
Dispatch continuations             8192K
Kernel Alloc Once                     8K
MALLOC                            367.4M
MALLOC (admin)                       32K
Memory Tag 242                       12K
OpenCL                               16K
STACK GUARD                        56.0M
Stack                              8784K
VM_ALLOCATE                        17.2M
__DATA                             18.7M
__IMAGE                             528K
__LINKEDIT                         82.5M
__TEXT                            153.8M
__UNICODE                           552K
mapped file                       200.9M
shared memory                        60K
===========                      =======
TOTAL                             916.2M

Model: MacBookPro8,1, BootROM MBP81.0047.B2D, 2 processors, Intel Core i5, 2.4 GHz, 16 GB, SMC 1.68f99
Graphics: Intel HD Graphics 3000, Intel HD Graphics 3000, Built-In
Memory Module: BANK 0/DIMM0, 8 GB, DDR3, 1333 MHz, 0x859B, 0x435438473353313333394D2E433136464E44
Memory Module: BANK 1/DIMM0, 8 GB, DDR3, 1333 MHz, 0x859B, 0x435438473353313333394D2E4D3136464E00
AirPort: spairport_wireless_card_type_airport_extreme (0x14E4, 0xD6), Broadcom BCM43xx 1.0 (5.106.98.100.24)
Bluetooth: Version 4.3.6f4 17916, 3 services, 18 devices, 1 incoming serial ports
Network Service: Wi-Fi, AirPort, en1
Serial ATA Device: ST9500325ASG, 500,11 GB
Serial ATA Device: HL-DT-ST DVDRW  GS31N
USB Device: Hub
USB Device: IR Receiver
USB Device: FaceTime HD Camera (Built-in)
USB Device: Hub
USB Device: BRCM2070 Hub
USB Device: Bluetooth USB Host Controller
USB Device: Apple Internal Keyboard / Trackpad
Thunderbolt Bus: MacBook Pro, Apple Inc., 25.1

couet · March 23, 2017, 2:16pm

It does not tell to much. I guess you need to compare the two macro to see where they differ and why one in working and the other not.

system · April 6, 2017, 2:16pm

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