I want to set 90% CL upper limits on the signal yield (Nsig). I have done this using two methods, the profile likelihood projection and the frequentist approach. The plots for them are attached herewith;
I would expect similar Nsig(UL) since the same PDF is used for both methods. But from the likelihood method, the Nsig(UL) is ~5, while from the frequentist approach, it’s ~3.8. What could be the reason for this difference?
Probably the difference in the two method is that your N_{sig} for profile likelihood is allowed to have negative value. If you force N_{sig} to be larger or equal to zero, the profile likelihood distribution will change shape.
Thank you for your response. Herewith I have attached the profile likelihood plot confining Nsig to be positive, but still, the Nsig(UL) is quite different from the frequentist approach.