PyROOT cannot be installed separately from ROOT as of today, I would recommend you do a second installation of ROOT if the one you have does not have PyROOT.
Note that the correct option in recent ROOT versions is --has-pyroot, not --has-python (EDIT: even more recent ROOT versions will actually complain when root-config is passed an invalid option rather than just replying “no”).
How did you install ROOT? Can you start the prompt running the root command from the terminal?