Hi,
I am a bit lost, why my python script crashes or better: via the python bindings ROOT crashes with a segmentation violation while I try to recreate a file
...
rootFileName = "%s.root" % (logPath)
rootFile = ROOT.TFile(rootFileName, "RECREATE") <--
rootTree = ROOT.TTree("jobTree", "jobTree")
...
I have already tried to use the repository-provided package than my self-compiled version or the officially provided binaries root_v5.34.14.Linux-slc6_amd64-gcc4.8.tar.gz
(after noticing some strange(?) version mismatch /home/thart/Programme/root/lib/libvectorDict.so = 53413, ROOT = 53414). However, I did not manage to get my script to run, while ROOT itself works?
My best guess is currently a srewup with my pathes, but I suppose that the ROOTSYS and LD_LIBRARYPATH looks usable to me. But it is still picking up libraries from /usr/lib64/root/ ??
> echo $ROOTSYS
/home/thart/Programme/root
> echo $LD_LIBRARY_PATH
/home/thart/Programme/root/lib:/home/thart/Programme/root/lib:
> echo $PATH
/usr/local/sbin/:/home/thart/Programme/root/bin:/usr/local/sbin/:/home/thart/Programme/root/bin:/usr/lib64/ccache:/usr/local/bin:/usr/bin:/bin:/usr/games:/usr/local/sbin:/usr/sbin:~/script:/home/thart/Programme/gsutil:/home/thart/.local/bin:/home/thart/bin:~/script:/home/thart/Programme/gsutil
Maybe somebody has an idea for me, what I have missed here?
Cheers and thanks,
Thomas
[code]> ./localLogParse.py
Warning in TClassTable::Add: class TUnixSystem already in TClassTable
Warning in TClassTable::Add: class TClass already in TClassTable
Warning in TClassTable::Add: class TFileMergeInfo already in TClassTable
Warning in TClassTable::Add: class TClassStreamer already in TClassTable
Warning in TClassTable::Add: class TMemberStreamer already in TClassTable
Warning in TClassTable::Add: class TVirtualIsAProxy already in TClassTable
Warning in TClassTable::Add: class TMethod already in TClassTable
Warning in TClassTable::Add: class TVirtualStreamerInfo already in TClassTable
Warning in TClassTable::Add: class TStreamerElement already in TClassTable
Warning in TClassTable::Add: class TDictionary already in TClassTable
Warning in TClassTable::Add: class TBaseClass already in TClassTable
Warning in TClassTable::Add: class TDataMember already in TClassTable
Warning in TClassTable::Add: class TClassAttributeMap already in TClassTable
Warning in TClassTable::Add: class TClassRef already in TClassTable
Warning in TClassTable::Add: class TRealData already in TClassTable
Warning in TClassTable::Add: class TCint already in TClassTable
Warning in TClassTable::Add: class TMethodCall already in TClassTable
Warning in TClassTable::Add: class ROOT::TSchemaRuleSet already in TClassTable
Warning in TClassTable::Add: class TFunction already in TClassTable
Warning in TClassTable::Add: class TInterpreter already in TClassTable
Warning in TClassTable::Add: class TClassGenerator already in TClassTable
Warning in TClassTable::Add: class TClassMenuItem already in TClassTable
Warning in TClassTable::Add: class TDataType already in TClassTable
Warning in TClassTable::Add: class TGlobal already in TClassTable
Warning in TClassTable::Add: class TIsAProxy already in TClassTable
Warning in TClassTable::Add: class TMethodArg already in TClassTable
Warning in TClassTable::Add: class ROOT::TSchemaRule already in TClassTable
Warning in TClassTable::Add: class ROOT::TSchemaRule::TSources already in TClassTable
Warning in TClassTable::Add: class ROOT::TSchemaMatch already in TClassTable
Warning in TClassTable::Add: class TStreamerBasicType already in TClassTable
Warning in TClassTable::Add: class TStreamerBase already in TClassTable
Warning in TClassTable::Add: class TStreamerBasicPointer already in TClassTable
Warning in TClassTable::Add: class TStreamerLoop already in TClassTable
Warning in TClassTable::Add: class TStreamerObject already in TClassTable
Warning in TClassTable::Add: class TStreamerObjectAny already in TClassTable
Warning in TClassTable::Add: class TStreamerObjectPointer already in TClassTable
Warning in TClassTable::Add: class TStreamerObjectAnyPointer already in TClassTable
Warning in TClassTable::Add: class TStreamerString already in TClassTable
Warning in TClassTable::Add: class TStreamerSTL already in TClassTable
Warning in TClassTable::Add: class TStreamerSTLstring already in TClassTable
Warning in TClassTable::Add: class TStreamerArtificial already in TClassTable
Warning in TClassTable::Add: class TToggle already in TClassTable
Warning in TClassTable::Add: class TToggleGroup already in TClassTable
Warning in TClassTable::Add: class TCollection already in TClassTable
Warning in TClassTable::Add: class TVirtualCollectionProxy already in TClassTable
Warning in TClassTable::Add: class TList already in TClassTable
Warning in TClassTable::Add: class TObjArray already in TClassTable
Warning in TClassTable::Add: class TClonesArray already in TClassTable
Warning in TClassTable::Add: class TRefTable already in TClassTable
Warning in TClassTable::Add: class TArray already in TClassTable
Warning in TClassTable::Add: class TArrayC already in TClassTable
Warning in TClassTable::Add: class TArrayD already in TClassTable
Warning in TClassTable::Add: class TArrayF already in TClassTable
Warning in TClassTable::Add: class TArrayI already in TClassTable
Warning in TClassTable::Add: class TArrayL64 already in TClassTable
Warning in TClassTable::Add: class TArrayL already in TClassTable
Warning in TClassTable::Add: class TArrayS already in TClassTable
Warning in TClassTable::Add: class TBits already in TClassTable
Warning in TClassTable::Add: class TBits::TReference already in TClassTable
Warning in TClassTable::Add: class TIterator already in TClassTable
Warning in TClassTable::Add: class TObjectTable already in TClassTable
Warning in TClassTable::Add: class TIter already in TClassTable
Warning in TClassTable::Add: class TSeqCollection already in TClassTable
Warning in TClassTable::Add: class TBtreeIter already in TClassTable
Warning in TClassTable::Add: class TBtree already in TClassTable
Warning in TClassTable::Add: class TClassTable already in TClassTable
Warning in TClassTable::Add: class TObjArrayIter already in TClassTable
Warning in TClassTable::Add: class TExMapIter already in TClassTable
Warning in TClassTable::Add: class TExMap already in TClassTable
Warning in TClassTable::Add: class TListIter already in TClassTable
Warning in TClassTable::Add: class THashTable already in TClassTable
Warning in TClassTable::Add: class THashList already in TClassTable
Warning in TClassTable::Add: class THashTableIter already in TClassTable
Warning in TClassTable::Add: class TMapIter already in TClassTable
Warning in TClassTable::Add: class TPair already in TClassTable
Warning in TClassTable::Add: class TMap already in TClassTable
Warning in TClassTable::Add: class TOrdCollectionIter already in TClassTable
Warning in TClassTable::Add: class TOrdCollection already in TClassTable
Warning in TClassTable::Add: class TRefArrayIter already in TClassTable
Warning in TClassTable::Add: class TRefArray already in TClassTable
Warning in TClassTable::Add: class vector<int,allocator >::iterator already in TClassTable
Warning in TClassTable::Add: class reverse_iterator<vector<int,allocator >::iterator> already in TClassTable
Warning in TClassTable::Add: class TSortedList already in TClassTable
Warning in TClassTable::Add: class SetWindowAttributes_t already in TClassTable
Warning in TClassTable::Add: class WindowAttributes_t already in TClassTable
Warning in TClassTable::Add: class Event_t already in TClassTable
Warning in TClassTable::Add: class GCValues_t already in TClassTable
Warning in TClassTable::Add: class ColorStruct_t already in TClassTable
Warning in TClassTable::Add: class PictureAttributes_t already in TClassTable
Warning in TClassTable::Add: class Segment_t already in TClassTable
Warning in TClassTable::Add: class Point_t already in TClassTable
Warning in TClassTable::Add: class Rectangle_t already in TClassTable
Warning in TClassTable::Add: class timespec already in TClassTable
Warning in TClassTable::Add: class TVirtualMutex already in TClassTable
Warning in TClassTable::Add: class TTimeStamp already in TClassTable
Warning in TClassTable::Add: class TLockGuard already in TClassTable
Warning in TClassTable::Add: class TVirtualPerfStats already in TClassTable
Warning in TClassTable::Add: class TInetAddress already in TClassTable
Warning in TClassTable::Add: class TParameter already in TClassTable
Warning in TClassTable::Add: class TVirtualAuth already in TClassTable
Warning in TClassTable::Add: class TUrl already in TClassTable
Warning in TClassTable::Add: class TFileInfoMeta already in TClassTable
Warning in TClassTable::Add: class TFileInfo already in TClassTable
Warning in TClassTable::Add: class TFileCollection already in TClassTable
Warning in TClassTable::Add: class TRedirectOutputGuard already in TClassTable
Warning in TClassTable::Add: class TVirtualMonitoringWriter already in TClassTable
Warning in TClassTable::Add: class TVirtualMonitoringReader already in TClassTable
Warning in TClassTable::Add: class TObjectSpy already in TClassTable
Warning in TClassTable::Add: class TObjectRefSpy already in TClassTable
Warning in TClassTable::Add: class TUri already in TClassTable
Warning in TClassTable::Add: class TVirtualTableInterface already in TClassTable
Warning in TClassTable::Add: class TBase64 already in TClassTable
Warning in TClassTable::Add: class pair<char*,int> already in TClassTable
Warning in TClassTable::Add: class pair<char*,long> already in TClassTable
Warning in TClassTable::Add: class pair<char*,float> already in TClassTable
Warning in TClassTable::Add: class pair<char*,double> already in TClassTable
Warning in TClassTable::Add: class pair<char*,void*> already in TClassTable
Warning in TClassTable::Add: class pair<char*,char*> already in TClassTable
Warning in TClassTable::Add: class pair<string,int> already in TClassTable
Warning in TClassTable::Add: class pair<string,long> already in TClassTable
Warning in TClassTable::Add: class pair<string,float> already in TClassTable
Warning in TClassTable::Add: class pair<string,double> already in TClassTable
Warning in TClassTable::Add: class pair<string,void*> already in TClassTable
Warning in TClassTable::Add: class pair<int,int> already in TClassTable
Warning in TClassTable::Add: class pair<int,long> already in TClassTable
Warning in TClassTable::Add: class pair<int,float> already in TClassTable
Warning in TClassTable::Add: class pair<int,double> already in TClassTable
Warning in TClassTable::Add: class pair<int,void*> already in TClassTable
Warning in TClassTable::Add: class pair<int,char*> already in TClassTable
Warning in TClassTable::Add: class pair<long,int> already in TClassTable
Warning in TClassTable::Add: class pair<long,long> already in TClassTable
Warning in TClassTable::Add: class pair<long,float> already in TClassTable
Warning in TClassTable::Add: class pair<long,double> already in TClassTable
Warning in TClassTable::Add: class pair<long,void*> already in TClassTable
Warning in TClassTable::Add: class pair<long,char*> already in TClassTable
Warning in TClassTable::Add: class pair<float,int> already in TClassTable
Warning in TClassTable::Add: class pair<float,long> already in TClassTable
Warning in TClassTable::Add: class pair<float,float> already in TClassTable
Warning in TClassTable::Add: class pair<float,double> already in TClassTable
Warning in TClassTable::Add: class pair<float,void*> already in TClassTable
Warning in TClassTable::Add: class pair<float,char*> already in TClassTable
Warning in TClassTable::Add: class pair<double,int> already in TClassTable
Warning in TClassTable::Add: class pair<double,long> already in TClassTable
Warning in TClassTable::Add: class pair<double,float> already in TClassTable
Warning in TClassTable::Add: class pair<double,double> already in TClassTable
Warning in TClassTable::Add: class pair<double,void*> already in TClassTable
Warning in TClassTable::Add: class pair<double,char*> already in TClassTable
Warning in TClassTable::Add: class pair<const char*,int> already in TClassTable
Warning in TClassTable::Add: class pair<const char*,long> already in TClassTable
Warning in TClassTable::Add: class pair<const char*,float> already in TClassTable
Warning in TClassTable::Add: class pair<const char*,double> already in TClassTable
Warning in TClassTable::Add: class pair<const char*,void*> already in TClassTable
Warning in TClassTable::Add: class pair<const char*,char*> already in TClassTable
Warning in TClassTable::Add: class pair<const string,int> already in TClassTable
Warning in TClassTable::Add: class pair<const string,long> already in TClassTable
Warning in TClassTable::Add: class pair<const string,float> already in TClassTable
Warning in TClassTable::Add: class pair<const string,double> already in TClassTable
Warning in TClassTable::Add: class pair<const string,void*> already in TClassTable
Warning in TClassTable::Add: class pair<const int,int> already in TClassTable
Warning in TClassTable::Add: class pair<const int,long> already in TClassTable
Warning in TClassTable::Add: class pair<const int,float> already in TClassTable
Warning in TClassTable::Add: class pair<const int,double> already in TClassTable
Warning in TClassTable::Add: class pair<const int,void*> already in TClassTable
Warning in TClassTable::Add: class pair<const int,char*> already in TClassTable
Warning in TClassTable::Add: class pair<const long,int> already in TClassTable
Warning in TClassTable::Add: class pair<const long,long> already in TClassTable
Warning in TClassTable::Add: class pair<const long,float> already in TClassTable
Warning in TClassTable::Add: class pair<const long,double> already in TClassTable
Warning in TClassTable::Add: class pair<const long,void*> already in TClassTable
Warning in TClassTable::Add: class pair<const long,char*> already in TClassTable
Warning in TClassTable::Add: class pair<const float,int> already in TClassTable
Warning in TClassTable::Add: class pair<const float,long> already in TClassTable
Warning in TClassTable::Add: class pair<const float,float> already in TClassTable
Warning in TClassTable::Add: class pair<const float,double> already in TClassTable
Warning in TClassTable::Add: class pair<const float,void*> already in TClassTable
Warning in TClassTable::Add: class pair<const float,char*> already in TClassTable
Warning in TClassTable::Add: class pair<const double,int> already in TClassTable
Warning in TClassTable::Add: class pair<const double,long> already in TClassTable
Warning in TClassTable::Add: class pair<const double,float> already in TClassTable
Warning in TClassTable::Add: class pair<const double,double> already in TClassTable
Warning in TClassTable::Add: class pair<const double,void*> already in TClassTable
Warning in TClassTable::Add: class pair<const double,char*> already in TClassTable
Warning in TClassTable::Add: class TParameter already in TClassTable
Warning in TClassTable::Add: class TParameter already in TClassTable
Warning in TClassTable::Add: class TParameter already in TClassTable
Warning in TClassTable::Add: class TParameter already in TClassTable
Warning in TClassTable::Add: class TParameter<Long64_t> already in TClassTable
Warning in TClassTable::Add: class TMemberInspector already in TClassTable
Warning in TClassTable::Add: class TObject already in TClassTable
Warning in TClassTable::Add: class TNamed already in TClassTable
Warning in TClassTable::Add: class TString already in TClassTable
Warning in TClassTable::Add: class string already in TClassTable
Warning in TClassTable::Add: class string::iterator already in TClassTable
Warning in TClassTable::Add: class TStorage already in TClassTable
Warning in TClassTable::Add: class TTimer already in TClassTable
Warning in TClassTable::Add: class TProcessID already in TClassTable
Warning in TClassTable::Add: class TRegexp already in TClassTable
Warning in TClassTable::Add: class TPRegexp already in TClassTable
Warning in TClassTable::Add: class TSubString already in TClassTable
Warning in TClassTable::Add: class TStringLong already in TClassTable
Warning in TClassTable::Add: class TQConnection already in TClassTable
Warning in TClassTable::Add: class TQObject already in TClassTable
Warning in TClassTable::Add: class TQObjSender already in TClassTable
Warning in TClassTable::Add: class TSignalHandler already in TClassTable
Warning in TClassTable::Add: class TStopwatch already in TClassTable
Warning in TClassTable::Add: class TUUID already in TClassTable
Warning in TClassTable::Add: class TExec already in TClassTable
Warning in TClassTable::Add: class TFolder already in TClassTable
Warning in TClassTable::Add: class TObjString already in TClassTable
Warning in TClassTable::Add: class TMD5 already in TClassTable
Warning in TClassTable::Add: class TMacro already in TClassTable
Warning in TClassTable::Add: class TMessageHandler already in TClassTable
Warning in TClassTable::Add: class TPluginManager already in TClassTable
Warning in TClassTable::Add: class TPluginHandler already in TClassTable
Warning in TClassTable::Add: class TPoint already in TClassTable
Warning in TClassTable::Add: class TPMERegexp already in TClassTable
Warning in TClassTable::Add: class TStringToken already in TClassTable
Warning in TClassTable::Add: class TProcessUUID already in TClassTable
Warning in TClassTable::Add: class TQClass already in TClassTable
Warning in TClassTable::Add: class TQCommand already in TClassTable
Warning in TClassTable::Add: class TQUndoManager already in TClassTable
Warning in TClassTable::Add: class TRefCnt already in TClassTable
Warning in TClassTable::Add: class TRef already in TClassTable
Warning in TClassTable::Add: class TSystemFile already in TClassTable
Warning in TClassTable::Add: class TSystemDirectory already in TClassTable
Warning in TClassTable::Add: class TSystem already in TClassTable
Warning in TClassTable::Add: class vector<TString,allocator >::iterator already in TClassTable
Warning in TClassTable::Add: class reverse_iterator<vector<TString,allocator >::iterator> already in TClassTable
Warning in TClassTable::Add: class TSysEvtHandler already in TClassTable
Warning in TClassTable::Add: class TStdExceptionHandler already in TClassTable
Warning in TClassTable::Add: class TTime already in TClassTable
Warning in TClassTable::Add: class FileStat_t already in TClassTable
Warning in TClassTable::Add: class UserGroup_t already in TClassTable
Warning in TClassTable::Add: class SysInfo_t already in TClassTable
Warning in TClassTable::Add: class CpuInfo_t already in TClassTable
Warning in TClassTable::Add: class MemInfo_t already in TClassTable
Warning in TClassTable::Add: class ProcInfo_t already in TClassTable
Warning in TClassTable::Add: class RedirectHandle_t already in TClassTable
Warning in TClassTable::Add: class TProcessEventTimer already in TClassTable
Warning in TClassTable::Add: class TRemoteObject already in TClassTable
Warning in TClassTable::Add: class TROOT already in TClassTable
Warning in TClassTable::Add: class TTask already in TClassTable
Warning in TClassTable::Add: class vector<string,allocator >::iterator already in TClassTable
Warning in TClassTable::Add: class reverse_iterator<vector<string,allocator >::iterator> already in TClassTable
Warning in TClassTable::Add: class TBuffer already in TClassTable
Warning in TClassTable::Add: class TDirectory already in TClassTable
Warning in TClassTable::Add: class TRootIOCtor already in TClassTable
Warning in TClassTable::Add: class TBrowser already in TClassTable
Warning in TClassTable::Add: class TApplicationImp already in TClassTable
Warning in TClassTable::Add: class TApplication already in TClassTable
Warning in TClassTable::Add: class TAtt3D already in TClassTable
Warning in TClassTable::Add: class TAttAxis already in TClassTable
Warning in TClassTable::Add: class TAttBBox already in TClassTable
Warning in TClassTable::Add: class TAttFill already in TClassTable
Warning in TClassTable::Add: class TAttLine already in TClassTable
Warning in TClassTable::Add: class TAttMarker already in TClassTable
Warning in TClassTable::Add: class TAttPad already in TClassTable
Warning in TClassTable::Add: class TAttText already in TClassTable
Warning in TClassTable::Add: class TBenchmark already in TClassTable
Warning in TClassTable::Add: class TBrowserImp already in TClassTable
Warning in TClassTable::Add: class TContextMenu already in TClassTable
Warning in TClassTable::Add: class TBuffer3D already in TClassTable
Warning in TClassTable::Add: class TCanvasImp already in TClassTable
Warning in TClassTable::Add: class TColor already in TClassTable
Warning in TClassTable::Add: class TColorGradient already in TClassTable
Warning in TClassTable::Add: class TContextMenuImp already in TClassTable
Warning in TClassTable::Add: class TVirtualPad already in TClassTable
Warning in TClassTable::Add: class TControlBarImp already in TClassTable
Warning in TClassTable::Add: class TDatime already in TClassTable
Warning in TClassTable::Add: class TEnv already in TClassTable
Warning in TClassTable::Add: class TEnvRec already in TClassTable
Warning in TClassTable::Add: class TInspectorImp already in TClassTable
Warning in TClassTable::Add: class TGuiFactory already in TClassTable
Warning in TClassTable::Add: class TFileHandler already in TClassTable
Warning in TClassTable::Add: class TStyle already in TClassTable
Warning in TClassTable::Add: class TVirtualFFT already in TClassTable
Warning in TClassTable::Add: class TVirtualViewer3D already in TClassTable
Warning in TClassTable::Add: class TVirtualGLPainter already in TClassTable
Warning in TClassTable::Add: class TVirtualGLManip already in TClassTable
Warning in TClassTable::Add: class TGLManager already in TClassTable
Warning in TClassTable::Add: class TGLPaintDevice already in TClassTable
Warning in TClassTable::Add: class TVirtualPadEditor already in TClassTable
Warning in TClassTable::Add: class TVirtualX already in TClassTable
Warning in TClassTable::Add: class TVirtualPadPainter already in TClassTable
Warning in TClassTable::Add: class TVirtualPS already in TClassTable
G__defined_typename_noerror reverse_iterator, max=0 still have a set range of 100 to 442
*** Break *** segmentation violation
===========================================================
There was a crash.
This is the entire stack trace of all threads:
#0 0x0000003f172bb10a in waitpid () from /lib64/libc.so.6
#1 0x0000003f1724179e in do_system () from /lib64/libc.so.6
#2 0x00007f338a69998d in TUnixSystem::StackTrace() () from /usr/lib64/root/libCore.so.5.34
#3 0x00007f338a69c283 in TUnixSystem::DispatchSignals(ESignals) () from /usr/lib64/root/libCore.so.5.34
#4
#5 0x0000003f1732fa9a in __strcmp_sse42 () from /lib64/libc.so.6
#6 0x00007f3389bd7365 in G__defined_tagname () from /usr/lib64/root/libCint.so.5.34
#7 0x00007f3389bd79a7 in G__search_tagname () from /usr/lib64/root/libCint.so.5.34
#8 0x00007f3389be703c in G__get_linked_tagnum () from /usr/lib64/root/libCint.so.5.34
#9 0x00007f3389be7087 in G__get_linked_tagnum_fwd () from /usr/lib64/root/libCint.so.5.34
#10 0x00007f3384a78788 in G__cpp_setup_tagtablerootcint_vector () from /home/thart/Programme/root/lib/libvectorDict.so
#11 0x00007f3384a787bf in G__cpp_setuprootcint_vector () from /home/thart/Programme/root/lib/libvectorDict.so
#12 0x00007f3389ba973a in G__call_setup_funcs () from /usr/lib64/root/libCint.so.5.34
#13 0x00007f3384a7e802 in _GLOBAL__sub_I_rootcint_vector.cxx () from /home/thart/Programme/root/lib/libvectorDict.so
#14 0x00007f3384a7e846 in __do_global_ctors_aux () from /home/thart/Programme/root/lib/libvectorDict.so
#15 0x00007f3384a73253 in _init () from /home/thart/Programme/root/lib/libvectorDict.so
#16 0x0000007c00000077 in ?? ()
#17 0x0000003f16e0eef0 in call_init.part.0 () from /lib64/ld-linux-x86-64.so.2
#18 0x0000003f16e0eff0 in _dl_init_internal () from /lib64/ld-linux-x86-64.so.2
#19 0x0000003f16e1336d in dl_open_worker () from /lib64/ld-linux-x86-64.so.2
#20 0x0000003f16e0edc6 in _dl_catch_error () from /lib64/ld-linux-x86-64.so.2
#21 0x0000003f16e12c0c in _dl_open () from /lib64/ld-linux-x86-64.so.2
#22 0x0000003f17a01026 in dlopen_doit () from /lib64/libdl.so.2
#23 0x0000003f16e0edc6 in _dl_catch_error () from /lib64/ld-linux-x86-64.so.2
#24 0x0000003f17a0163c in _dlerror_run () from /lib64/libdl.so.2
#25 0x0000003f17a010c1 in dlopen
GLIBC_2.2.5 () from /lib64/libdl.so.2
#26 0x00007f3389c15345 in G__dlopen () from /usr/lib64/root/libCint.so.5.34
#27 0x00007f3389c1555f in G__shl_load () from /usr/lib64/root/libCint.so.5.34
#28 0x00007f3389b9469f in G__loadfile () from /usr/lib64/root/libCint.so.5.34
#29 0x00007f338a65fc58 in TCint::Load(char const*, bool) () from /usr/lib64/root/libCore.so.5.34
#30 0x00007f338a613724 in TSystem::Load(char const*, char const*, bool) () from /usr/lib64/root/libCore.so.5.34
#31 0x00007f338a817830 in G__G__Base2_333_0_122(G__value*, char const*, G__param*, int) () from /usr/lib64/root/libCore.so.5.34
#32 0x00007f3389c17a5f in Cint::G__CallFunc::Execute(void*) () from /usr/lib64/root/libCint.so.5.34
#33 0x00007f3384d20aba in stlLoader() () from /usr/lib64/root/cint/cint/stl/vector.dll
#34 0x00007f3384d20b19 in _GLOBAL__sub_I_stlLoader_vector.cc () from /usr/lib64/root/cint/cint/stl/vector.dll
#35 0x0000003f16e0ef36 in call_init.part.0 () from /lib64/ld-linux-x86-64.so.2
#36 0x0000003f16e0eff0 in _dl_init_internal () from /lib64/ld-linux-x86-64.so.2
#37 0x0000003f16e1336d in dl_open_worker () from /lib64/ld-linux-x86-64.so.2
#38 0x0000003f16e0edc6 in _dl_catch_error () from /lib64/ld-linux-x86-64.so.2
#39 0x0000003f16e12c0c in _dl_open () from /lib64/ld-linux-x86-64.so.2
#40 0x0000003f17a01026 in dlopen_doit () from /lib64/libdl.so.2
#41 0x0000003f16e0edc6 in _dl_catch_error () from /lib64/ld-linux-x86-64.so.2
#42 0x0000003f17a0163c in _dlerror_run () from /lib64/libdl.so.2
#43 0x0000003f17a010c1 in dlopen
GLIBC_2.2.5 () from /lib64/libdl.so.2
#44 0x00007f3389c15345 in G__dlopen () from /usr/lib64/root/libCint.so.5.34
#45 0x00007f3389c1555f in G__shl_load () from /usr/lib64/root/libCint.so.5.34
#46 0x00007f3389b9469f in G__loadfile () from /usr/lib64/root/libCint.so.5.34
#47 0x00007f3389b958d7 in G__include_file () from /usr/lib64/root/libCint.so.5.34
#48 0x00007f3389b5575a in G__pragma () from /usr/lib64/root/libCint.so.5.34
#49 0x00007f3389b45a23 in G__exec_statement () from /usr/lib64/root/libCint.so.5.34
#50 0x00007f3389b95285 in G__loadfile () from /usr/lib64/root/libCint.so.5.34
#51 0x00007f3389b958d7 in G__include_file () from /usr/lib64/root/libCint.so.5.34
#52 0x00007f3389b46bbd in G__exec_statement () from /usr/lib64/root/libCint.so.5.34
#53 0x00007f3389bd9dd6 in G__define_struct () from /usr/lib64/root/libCint.so.5.34
#54 0x00007f3389b4a5b7 in G__exec_statement () from /usr/lib64/root/libCint.so.5.34
#55 0x00007f3389b95285 in G__loadfile () from /usr/lib64/root/libCint.so.5.34
#56 0x00007f3389b958d7 in G__include_file () from /usr/lib64/root/libCint.so.5.34
#57 0x00007f3389b46bbd in G__exec_statement () from /usr/lib64/root/libCint.so.5.34
#58 0x00007f3389c18157 in G__exec_tempfile_core () from /usr/lib64/root/libCint.so.5.34
#59 0x00007f3389c1971e in G__exec_tempfile_fp () from /usr/lib64/root/libCint.so.5.34
#60 0x00007f3389b21a76 in G__process_cmd () from /usr/lib64/root/libCint.so.5.34
#61 0x00007f338a667851 in TCint::ProcessLine(char const*, TInterpreter::EErrorCode*) () from /usr/lib64/root/libCore.so.5.34
#62 0x00007f338a65da93 in TCint::ProcessLineSynch(char const*, TInterpreter::EErrorCode*) () from /usr/lib64/root/libCore.so.5.34
#63 0x00007f338a5c7adc in TApplication::ProcessLine(char const*, bool, int*) () from /usr/lib64/root/libCore.so.5.34
#64 0x00007f338b7de4a6 in PyROOT::TPyROOTApplication::TPyROOTApplication(char const*, int*, char**, bool) () from /usr/lib64/python2.7/site-packages/libPyROOT.so
#65 0x00007f338b7de679 in PyROOT::TPyROOTApplication::CreatePyROOTApplication(bool) () from /usr/lib64/python2.7/site-packages/libPyROOT.so
#66 0x00007f338b7ee1c0 in G__G__PyROOT_235_0_1(G__value*, char const*, G__param*, int) () from /usr/lib64/python2.7/site-packages/libPyROOT.so
#67 0x00007f3389c17a5f in Cint::G__CallFunc::Execute(void*) () from /usr/lib64/root/libCint.so.5.34
#68 0x00007f338b7dae5e in PyROOT::TBoolExecutor::Execute(Cint::G__CallFunc*, void*, bool) () from /usr/lib64/python2.7/site-packages/libPyROOT.so
#69 0x00007f338b7d6b27 in PyROOT::TMethodHolder<PyROOT::TScopeAdapter, PyROOT::TMemberAdapter>::CallSafe(void*, bool) () from /usr/lib64/python2.7/site-packages/libPyROOT.so
#70 0x00007f338b7d6ce9 in PyROOT::TMethodHolder<PyROOT::TScopeAdapter, PyROOT::TMemberAdapter>::Execute(void*, bool) () from /usr/lib64/python2.7/site-packages/libPyROOT.so
#71 0x00007f338b7d1090 in PyROOT::(anonymous namespace)::mp_call(PyROOT::MethodProxy*, _object*, _object*) () from /usr/lib64/python2.7/site-packages/libPyROOT.so
#72 0x0000003f34249c0e in PyObject_Call () from /lib64/libpython2.7.so.1.0
#73 0x0000003f342d9583 in PyEval_EvalFrameEx () from /lib64/libpython2.7.so.1.0
#74 0x0000003f342dcef1 in PyEval_EvalFrameEx () from /lib64/libpython2.7.so.1.0
#75 0x0000003f342ddcbf in PyEval_EvalCodeEx () from /lib64/libpython2.7.so.1.0
#76 0x0000003f3426d926 in ?? () from /lib64/libpython2.7.so.1.0
#77 0x0000003f34249c0e in PyObject_Call () from /lib64/libpython2.7.so.1.0
#78 0x0000003f34258200 in ?? () from /lib64/libpython2.7.so.1.0
#79 0x0000003f34249c0e in PyObject_Call () from /lib64/libpython2.7.so.1.0
#80 0x0000003f3424a3ee in PyObject_CallFunctionObjArgs () from /lib64/libpython2.7.so.1.0
#81 0x0000003f34299b5f in ?? () from /lib64/libpython2.7.so.1.0
#82 0x0000003f342a093a in ?? () from /lib64/libpython2.7.so.1.0
#83 0x0000003f342d9031 in PyEval_EvalFrameEx () from /lib64/libpython2.7.so.1.0
#84 0x0000003f342ddcbf in PyEval_EvalCodeEx () from /lib64/libpython2.7.so.1.0
#85 0x0000003f342dc2b3 in PyEval_EvalFrameEx () from /lib64/libpython2.7.so.1.0
#86 0x0000003f342ddcbf in PyEval_EvalCodeEx () from /lib64/libpython2.7.so.1.0
#87 0x0000003f342ddd92 in PyEval_EvalCode () from /lib64/libpython2.7.so.1.0
#88 0x0000003f342f6f7a in ?? () from /lib64/libpython2.7.so.1.0
#89 0x0000003f342f7d72 in PyRun_FileExFlags () from /lib64/libpython2.7.so.1.0
#90 0x0000003f342f878b in PyRun_SimpleFileExFlags () from /lib64/libpython2.7.so.1.0
#91 0x0000003f34309c52 in Py_Main () from /lib64/libpython2.7.so.1.0
#92 0x0000003f17221a05 in __libc_start_main () from /lib64/libc.so.6
#93 0x0000000000400721 in _start ()
The lines below might hint at the cause of the crash.
If they do not help you then please submit a bug report at
http://root.cern.ch/bugs. Please post the ENTIRE stack trace
from above as an attachment in addition to anything else
that might help us fixing this issue.
#5 0x0000003f1732fa9a in __strcmp_sse42 () from /lib64/libc.so.6
Traceback (most recent call last):
File “/home/thart/Scripts/SGEJobMon/localLogParse.py”, line 71, in
parseAccounting("./accounting-20140126")
File “/home/thart/Scripts/SGEJobMon/localLogParse.py”, line 34, in parseAccounting
rootFile = ROOT.TFile(rootFileName, “NEW”)
File “/usr/lib64/python2.7/site-packages/ROOT.py”, line 433, in __getattr1
self.__finalSetup()
File “/usr/lib64/python2.7/site-packages/ROOT.py”, line 505, in __finalSetup
if appc.CreatePyROOTApplication():
SystemError: problem in C++; program state has been reset
*** Break *** segmentation violation
===========================================================
There was a crash.
This is the entire stack trace of all threads:
#0 0x0000003f172bb10a in waitpid () from /lib64/libc.so.6
#1 0x0000003f1724179e in do_system () from /lib64/libc.so.6
#2 0x00007f338a69998d in TUnixSystem::StackTrace() () from /usr/lib64/root/libCore.so.5.34
#3 0x00007f338a69c283 in TUnixSystem::DispatchSignals(ESignals) () from /usr/lib64/root/libCore.so.5.34
#4
#5 0x0000003f1732fa9a in __strcmp_sse42 () from /lib64/libc.so.6
#6 0x00007f3389bd7365 in G__defined_tagname () from /usr/lib64/root/libCint.so.5.34
#7 0x00007f3389bd79a7 in G__search_tagname () from /usr/lib64/root/libCint.so.5.34
#8 0x00007f3389be703c in G__get_linked_tagnum () from /usr/lib64/root/libCint.so.5.34
#9 0x00007f3389be7087 in G__get_linked_tagnum_fwd () from /usr/lib64/root/libCint.so.5.34
#10 0x00007f3384a78788 in G__cpp_setup_tagtablerootcint_vector () from /home/thart/Programme/root/lib/libvectorDict.so
#11 0x00007f3384a787bf in G__cpp_setuprootcint_vector () from /home/thart/Programme/root/lib/libvectorDict.so
#12 0x00007f3389ba973a in G__call_setup_funcs () from /usr/lib64/root/libCint.so.5.34
#13 0x00007f338a65fd4e in TCint::InitializeDictionaries() () from /usr/lib64/root/libCore.so.5.34
#14 0x00007f338a679579 in TClass::Init(char const*, short, std::type_info const*, TVirtualIsAProxy*, void ()(void, TMemberInspector&), char const*, char const*, int, int, bool) () from /usr/lib64/root/libCore.so.5.34
#15 0x00007f338a67a2be in TClass::TClass(char const*, short, std::type_info const&, TVirtualIsAProxy*, void ()(void, TMemberInspector&), char const*, char const*, int, int, bool) () from /usr/lib64/root/libCore.so.5.34
#16 0x00007f338a67a459 in ROOT::CreateClass(char const*, short, std::type_info const&, TVirtualIsAProxy*, void ()(void, TMemberInspector&), char const*, char const*, int, int) () from /usr/lib64/root/libCore.so.5.34
#17 0x00007f338b7f726c in ROOT::TDefaultInitBehavior::CreateClass(char const*, short, std::type_info const&, TVirtualIsAProxy*, void ()(void, TMemberInspector&), char const*, char const*, int, int) const () from /usr/lib64/python2.7/site-packages/libPyROOT.so
#18 0x00007f338a65a48c in ROOT::TGenericClassInfo::GetClass() () from /usr/lib64/root/libCore.so.5.34
#19 0x00007f338a853165 in TObjString::Class() () from /usr/lib64/root/libCore.so.5.34
#20 0x00007f338a5f7c48 in TObjString::IsEqual(TObject const*) const () from /usr/lib64/root/libCore.so.5.34
#21 0x00007f338a64281d in TList::FindObject(TObject const*) const () from /usr/lib64/root/libCore.so.5.34
#22 0x00007f338a6544cb in TMap::Remove(TObject*) () from /usr/lib64/root/libCore.so.5.34
#23 0x00007f338a644dce in TClassTable::Remove(char const*) () from /usr/lib64/root/libCore.so.5.34
#24 0x00007f338b7f7212 in ROOT::TDefaultInitBehavior::Unregister(char const*) const () from /usr/lib64/python2.7/site-packages/libPyROOT.so
#25 0x00007f338a65a817 in ROOT::TGenericClassInfo::~TGenericClassInfo() () from /usr/lib64/root/libCore.so.5.34
#26 0x0000003f17238ea1 in __run_exit_handlers () from /lib64/libc.so.6
#27 0x0000003f17238f25 in exit () from /lib64/libc.so.6
#28 0x0000003f17221a0c in __libc_start_main () from /lib64/libc.so.6
#29 0x0000000000400721 in _start ()
The lines below might hint at the cause of the crash.
If they do not help you then please submit a bug report at
http://root.cern.ch/bugs. Please post the ENTIRE stack trace
from above as an attachment in addition to anything else
that might help us fixing this issue.
#5 0x0000003f1732fa9a in __strcmp_sse42 () from /lib64/libc.so.6
===========================================================[/code]