PROOF-Lite crash on root v5.34.21

ROOT
1

PROOF crashed in fresh installed root v5.34.21 while it is working for root v5.34.18 installed in the same PC.

root [0] .x runPhotonAnalysis.C
…/data/RUN_1_p0.17_ang0_sl0/outputRoot_*.root
+++ Starting PROOF-Lite with 8 workers +++
Opening connections to workers: OK (8 workers)
Setting up worker servers: OK (8 workers)
PROOF set to parallel mode (8 workers)
8.000000
340.000000
RUN_1_p0.17_ang0_sl0_R8.0_Z340.0.root
Warning in TProofLite::ShowMissingFiles: no (last) query found: do nothing
Warning in TProofLite::ShowMissingFiles: no (last) query found: do nothing

Info in TProofLite::SetQueryRunning: starting query: 1
Info in TProofQueryResult::SetRunning: nwrks: 8
Looking up for exact location of files: OK (50 files)
Looking up for exact location of files: OK (50 files)
Info in TPacketizerAdaptive::TPacketizerAdaptive: Setting max number of workers per node to 8
Validating files: OK (50 files)
Info in TPacketizerAdaptive::InitStats: fraction of remote files 0.000000
0.2: caught exception triggered by signal ‘1’ while processing dset:‘TDSet:InputData’, file:’/home/nikos/MyWork/attenuation/scripts/…/data/RUN_1_p0.17_ang0_sl0/outputRoot_10.root’ - check logs for possible stacktrace - last event: 0
Info in TProofLite::MarkBad:
+++ Message from master at nikos-PC : marking nikos-PC:-1 (0.2) as bad
+++ Reason: undefined message in TProof::CollectInputFrom(…)

+++ Message from master at nikos-PC : marking nikos-PC:-1 (0.2) as bad
+++ Reason: undefined message in TProof::CollectInputFrom(…)

+++ Most likely your code crashed
+++ Please check the session logs for error messages either using
+++ the ‘Show logs’ button or executing
+++
+++ root [] TProof::Mgr(“nikos-PC”)->GetSessionLogs()->Display("*")

entries: 1000 (1000)
Error in TPacketizerAdaptive::SplitPerHost: Error removing a missing file
Info in TPacketizerAdaptive::InitStats: fraction of remote files 0.000000
0.6: caught exception triggered by signal ‘1’ while processing dset:‘TDSet:InputData’, file:’/home/nikos/MyWork/attenuation/scripts/…/data/RUN_1_p0.17_ang0_sl0/outputRoot_1.root’ - check logs for possible stacktrace - last event: 0
Info in TProofLite::MarkBad:
+++ Message from master at nikos-PC : marking nikos-PC:-1 (0.6) as bad
+++ Reason: undefined message in TProof::CollectInputFrom(…)

+++ Message from master at nikos-PC : marking nikos-PC:-1 (0.6) as bad
+++ Reason: undefined message in TProof::CollectInputFrom(…)

+++ Most likely your code crashed
+++ Please check the session logs for error messages either using
+++ the ‘Show logs’ button or executing
+++
+++ root [] TProof::Mgr(“nikos-PC”)->GetSessionLogs()->Display("*")

entries: 1000 (1000)
Error in TPacketizerAdaptive::SplitPerHost: Error removing a missing file
Info in TPacketizerAdaptive::InitStats: fraction of remote files 0.000000
0.5: caught exception triggered by signal ‘1’ while processing dset:‘TDSet:InputData’, file:’/home/nikos/MyWork/attenuation/scripts/…/data/RUN_1_p0.17_ang0_sl0/outputRoot_13.root’ - check logs for possible stacktrace - last event: 0
Info in TProofLite::MarkBad:
+++ Message from master at nikos-PC : marking nikos-PC:-1 (0.5) as bad
+++ Reason: undefined message in TProof::CollectInputFrom(…)

+++ Message from master at nikos-PC : marking nikos-PC:-1 (0.5) as bad
+++ Reason: undefined message in TProof::CollectInputFrom(…)

+++ Most likely your code crashed
+++ Please check the session logs for error messages either using
+++ the ‘Show logs’ button or executing
+++
+++ root [] TProof::Mgr(“nikos-PC”)->GetSessionLogs()->Display("*")

entries: 1000 (1000)
Error in TPacketizerAdaptive::SplitPerHost: Error removing a missing file
Info in TPacketizerAdaptive::InitStats: fraction of remote files 0.000000
0.7: caught exception triggered by signal ‘1’ while processing dset:‘TDSet:InputData’, file:’/home/nikos/MyWork/attenuation/scripts/…/data/RUN_1_p0.17_ang0_sl0/outputRoot_12.root’ - check logs for possible stacktrace - last event: 0
Info in TProofLite::MarkBad:
+++ Message from master at nikos-PC : marking nikos-PC:-1 (0.7) as bad
+++ Reason: undefined message in TProof::CollectInputFrom(…)

+++ Message from master at nikos-PC : marking nikos-PC:-1 (0.7) as bad
+++ Reason: undefined message in TProof::CollectInputFrom(…)

+++ Most likely your code crashed
+++ Please check the session logs for error messages either using
+++ the ‘Show logs’ button or executing
+++
+++ root [] TProof::Mgr(“nikos-PC”)->GetSessionLogs()->Display("*")

entries: 1000 (1000)
Error in TPacketizerAdaptive::SplitPerHost: Error removing a missing file
Info in TPacketizerAdaptive::InitStats: fraction of remote files 0.000000
0.0: caught exception triggered by signal ‘1’ while processing dset:‘TDSet:InputData’, file:’/home/nikos/MyWork/attenuation/scripts/…/data/RUN_1_p0.17_ang0_sl0/outputRoot_11.root’ - check logs for possible stacktrace - last event: 0
Info in TProofLite::MarkBad:
+++ Message from master at nikos-PC : marking nikos-PC:-1 (0.0) as bad
+++ Reason: undefined message in TProof::CollectInputFrom(…)

+++ Message from master at nikos-PC : marking nikos-PC:-1 (0.0) as bad
+++ Reason: undefined message in TProof::CollectInputFrom(…)

+++ Most likely your code crashed
+++ Please check the session logs for error messages either using
+++ the ‘Show logs’ button or executing
+++
+++ root [] TProof::Mgr(“nikos-PC”)->GetSessionLogs()->Display("*")

entries: 1000 (1000)
Error in TPacketizerAdaptive::SplitPerHost: Error removing a missing file
Info in TPacketizerAdaptive::InitStats: fraction of remote files 0.000000
0.1: caught exception triggered by signal ‘1’ while processing dset:‘TDSet:InputData’, file:’/home/nikos/MyWork/attenuation/scripts/…/data/RUN_1_p0.17_ang0_sl0/outputRoot_14.root’ - check logs for possible stacktrace - last event: 0
Info in TProofLite::MarkBad:
+++ Message from master at nikos-PC : marking nikos-PC:-1 (0.1) as bad
+++ Reason: undefined message in TProof::CollectInputFrom(…)

+++ Message from master at nikos-PC : marking nikos-PC:-1 (0.1) as bad
+++ Reason: undefined message in TProof::CollectInputFrom(…)

+++ Most likely your code crashed
+++ Please check the session logs for error messages either using
+++ the ‘Show logs’ button or executing
+++
+++ root [] TProof::Mgr(“nikos-PC”)->GetSessionLogs()->Display("*")

entries: 1000 (1000)
Error in TPacketizerAdaptive::SplitPerHost: Error removing a missing file
Info in TPacketizerAdaptive::InitStats: fraction of remote files 0.000000
0.4: caught exception triggered by signal ‘1’ while processing dset:‘TDSet:InputData’, file:’/home/nikos/MyWork/attenuation/scripts/…/data/RUN_1_p0.17_ang0_sl0/outputRoot_16.root’ - check logs for possible stacktrace - last event: 0
Info in TProofLite::MarkBad:
+++ Message from master at nikos-PC : marking nikos-PC:-1 (0.4) as bad
+++ Reason: undefined message in TProof::CollectInputFrom(…)

+++ Message from master at nikos-PC : marking nikos-PC:-1 (0.4) as bad
+++ Reason: undefined message in TProof::CollectInputFrom(…)

+++ Most likely your code crashed
+++ Please check the session logs for error messages either using
+++ the ‘Show logs’ button or executing
+++
+++ root [] TProof::Mgr(“nikos-PC”)->GetSessionLogs()->Display("*")

entries: 1000 (1000)
Error in TPacketizerAdaptive::SplitPerHost: Error removing a missing file
Info in TPacketizerAdaptive::InitStats: fraction of remote files 0.000000
0.3: caught exception triggered by signal ‘1’ while processing dset:‘TDSet:InputData’, file:’/home/nikos/MyWork/attenuation/scripts/…/data/RUN_1_p0.17_ang0_sl0/outputRoot_15.root’ - check logs for possible stacktrace - last event: 0
Info in TProofLite::MarkBad:
+++ Message from master at nikos-PC : marking nikos-PC:-1 (0.3) as bad
+++ Reason: undefined message in TProof::CollectInputFrom(…)

+++ Message from master at nikos-PC : marking nikos-PC:-1 (0.3) as bad
+++ Reason: undefined message in TProof::CollectInputFrom(…)

+++ Most likely your code crashed
+++ Please check the session logs for error messages either using
+++ the ‘Show logs’ button or executing
+++
+++ root [] TProof::Mgr(“nikos-PC”)->GetSessionLogs()->Display("*")

entries: 1000 (1000)
Error in TPacketizerAdaptive::SplitPerHost: Error removing a missing file
Info in TPacketizerAdaptive::InitStats: fraction of remote files 0.000000

*** Break *** segmentation violation

===========================================================
There was a crash.
This is the entire stack trace of all threads:

#0 0x00007f98fecba5cc in __libc_waitpid (pid=8503, stat_loc=stat_loc
entry=0x7fff2947bf40, options=options
entry=0) at …/sysdeps/unix/sysv/linux/waitpid.c:31
#1 0x00007f98fec3f1d2 in do_system (line=) at …/sysdeps/posix/system.c:148
#2 0x00007f98ff96ea43 in TUnixSystem::StackTrace() () from /home/nikos/Software/root/lib/libCore.so
#3 0x00007f98ff97074c in TUnixSystem::DispatchSignals(ESignals) () from /home/nikos/Software/root/lib/libCore.so
#4
#5 0x00007f98f3fd7cd4 in photonSelector::Terminate() () from /home/nikos/MyWork/attenuation/scripts/./photonSelector_C.so
#6 0x00007f98f4844120 in TProofPlayerLite::Finalize(bool, bool) () from /home/nikos/Software/root/lib/libProofPlayer.so
#7 0x00007f98f48459be in TProofPlayerLite::Process(TDSet*, char const*, char const*, long long, long long) () from /home/nikos/Software/root/lib/libProofPlayer.so
#8 0x00007f98f4d9fa76 in TProofLite::Process(TDSet*, char const*, char const*, long long, long long) () from /home/nikos/Software/root/lib/libProof.so
#9 0x00007f98fb606533 in G__G__Tree_130_0_161(G__value*, char const*, G__param*, int) () from /home/nikos/Software/root/lib/libTree.so
#10 0x00007f98fde6b94d in Cint::G__ExceptionWrapper(int ()(G__value, char const*, G__param*, int), G__value*, char*, G__param*, int) () from /home/nikos/Software/root/lib/libCint.so
#11 0x00007f98fdf0fbc7 in G__execute_call () from /home/nikos/Software/root/lib/libCint.so
#12 0x00007f98fdf0ff85 in G__call_cppfunc () from /home/nikos/Software/root/lib/libCint.so
#13 0x00007f98fdeef4ff in G__interpret_func () from /home/nikos/Software/root/lib/libCint.so
#14 0x00007f98fdedcc89 in G__getfunction () from /home/nikos/Software/root/lib/libCint.so
#15 0x00007f98fdfc5fd5 in G__getstructmem(int, G__FastAllocString&, char*, int, char*, int*, G__var_array*, int) () from /home/nikos/Software/root/lib/libCint.so
#16 0x00007f98fdfbcf9c in G__getvariable () from /home/nikos/Software/root/lib/libCint.so
#17 0x00007f98fdeb6b0f in G__getitem () from /home/nikos/Software/root/lib/libCint.so
#18 0x00007f98fdebc4b5 in G__getexpr () from /home/nikos/Software/root/lib/libCint.so
#19 0x00007f98fdf3f48d in G__exec_statement () from /home/nikos/Software/root/lib/libCint.so
#20 0x00007f98fdef0a5c in G__interpret_func () from /home/nikos/Software/root/lib/libCint.so
#21 0x00007f98fdedcce7 in G__getfunction () from /home/nikos/Software/root/lib/libCint.so
#22 0x00007f98fdeb7012 in G__getitem () from /home/nikos/Software/root/lib/libCint.so
#23 0x00007f98fdebc4b5 in G__getexpr () from /home/nikos/Software/root/lib/libCint.so
#24 0x00007f98fdec7d8b in G__calc_internal () from /home/nikos/Software/root/lib/libCint.so
#25 0x00007f98fdf4eb9f in G__process_cmd () from /home/nikos/Software/root/lib/libCint.so
#26 0x00007f98ff936900 in TCint::ProcessLine(char const*, TInterpreter::EErrorCode*) () from /home/nikos/Software/root/lib/libCore.so
#27 0x00007f98ff92f86b in TCint::ProcessLineSynch(char const*, TInterpreter::EErrorCode*) () from /home/nikos/Software/root/lib/libCore.so
#28 0x00007f98ff89e17c in TApplication::ExecuteFile(char const*, int*, bool) () from /home/nikos/Software/root/lib/libCore.so
#29 0x00007f98ff89d6b0 in TApplication::ProcessLine(char const*, bool, int*) () from /home/nikos/Software/root/lib/libCore.so
#30 0x00007f98ff4eb229 in TRint::HandleTermInput() () from /home/nikos/Software/root/lib/libRint.so
#31 0x00007f98ff96ff15 in TUnixSystem::CheckDescriptors() () from /home/nikos/Software/root/lib/libCore.so
#32 0x00007f98ff970a3a in TUnixSystem::DispatchOneEvent(bool) () from /home/nikos/Software/root/lib/libCore.so
#33 0x00007f98ff8f4b66 in TSystem::InnerLoop() () from /home/nikos/Software/root/lib/libCore.so
#34 0x00007f98ff8f5770 in TSystem::Run() () from /home/nikos/Software/root/lib/libCore.so
#35 0x00007f98ff89b8af in TApplication::Run(bool) () from /home/nikos/Software/root/lib/libCore.so
#36 0x00007f98ff4ec45e in TRint::Run(bool) () from /home/nikos/Software/root/lib/libRint.so
#37 0x0000000000400fdc in main ()

The lines below might hint at the cause of the crash.
If they do not help you then please submit a bug report at
root.cern.ch/bugs. Please post the ENTIRE stack trace
from above as an attachment in addition to anything else
that might help us fixing this issue.

#5 0x00007f98f3fd7cd4 in photonSelector::Terminate() () from /home/nikos/MyWork/attenuation/scripts/./photonSelector_C.so
#6 0x00007f98f4844120 in TProofPlayerLite::Finalize(bool, bool) () from /home/nikos/Software/root/lib/libProofPlayer.so
#7 0x00007f98f48459be in TProofPlayerLite::Process(TDSet*, char const*, char const*, long long, long long) () from /home/nikos/Software/root/lib/libProofPlayer.so
#8 0x00007f98f4d9fa76 in TProofLite::Process(TDSet*, char const*, char const*, long long, long long) () from /home/nikos/Software/root/lib/libProof.so

2

Hello,

The crash is when reading the first event in each file.
Could you say a bit more on how you are using PROOF and the additional code you need to load, if any?

G. Ganis