Installing root for using pyroot in Anaconda package

woodo_lee · January 7, 2020, 6:24am

Hi. I have a trouble about installing the root with my new mac.
I installed the root from the git repository and Anaconda.
But I encountered the error when I import the ROOT in the python.
Root is working well.
Have you ever seen this errors and solve that?
user name is woodolee
Python 3.7.4 (default, Aug 13 2019, 15:17:50)

[Clang 4.0.1 (tags/RELEASE_401/final)] :: Anaconda, Inc. on darwin

Type “help”, “copyright”, “credits” or “license” for more information.

>>> import ROOT

Warning in < UnknownClass::ReadRootmapFile >: class TPyArg found in libPyROOT.so is already in libROOTTPython.so 

Warning in < UnknownClass::ReadRootmapFile >: class TPyReturn found in libPyROOT.so is already in libROOTTPython.so 

Warning in < UnknownClass::ReadRootmapFile >: class TPython found in libPyROOT.so is already in libROOTTPython.so 

 *** Break *** segmentation violation

[/usr/lib/system/libsystem_platform.dylib] _sigtramp (no debug info)

[/usr/lib/system/libsystem_malloc.dylib] szone_size (no debug info)

[/Users/woodolee/anaconda3/lib/libpython3.7m.dylib] PyUnicode_InternFromString (no debug info)

[/usr/local/lib/libPyROOT.so] PyROOT::CreatePyStrings() (no debug info)

[/usr/local/lib/libPyROOT.so] PyInit_libPyROOT (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyImport_LoadDynamicModuleWithSpec (no debug info)

[/Users/woodolee/anaconda3/bin/python] _imp_create_dynamic (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyMethodDef_RawFastCallDict (no debug info)

[/Users/woodolee/anaconda3/bin/python] PyCFunction_Call (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyEval_EvalFrameDefault (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyEval_EvalCodeWithName (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyFunction_FastCallKeywords (no debug info)

[/Users/woodolee/anaconda3/bin/python] call_function (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyEval_EvalFrameDefault (no debug info)

[/Users/woodolee/anaconda3/bin/python] function_code_fastcall (no debug info)

[/Users/woodolee/anaconda3/bin/python] call_function (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyEval_EvalFrameDefault (no debug info)

[/Users/woodolee/anaconda3/bin/python] function_code_fastcall (no debug info)

[/Users/woodolee/anaconda3/bin/python] call_function (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyEval_EvalFrameDefault (no debug info)

[/Users/woodolee/anaconda3/bin/python] function_code_fastcall (no debug info)

[/Users/woodolee/anaconda3/bin/python] call_function (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyEval_EvalFrameDefault (no debug info)

[/Users/woodolee/anaconda3/bin/python] function_code_fastcall (no debug info)

[/Users/woodolee/anaconda3/bin/python] call_function (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyEval_EvalFrameDefault (no debug info)

[/Users/woodolee/anaconda3/bin/python] function_code_fastcall (no debug info)

[/Users/woodolee/anaconda3/bin/python] object_vacall (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyObject_CallMethodIdObjArgs (no debug info)

[/Users/woodolee/anaconda3/bin/python] PyImport_ImportModuleLevelObject (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyEval_EvalFrameDefault (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyEval_EvalCodeWithName (no debug info)

[/Users/woodolee/anaconda3/bin/python] builtin_exec (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyMethodDef_RawFastCallDict (no debug info)

[/Users/woodolee/anaconda3/bin/python] PyCFunction_Call (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyEval_EvalFrameDefault (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyEval_EvalCodeWithName (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyFunction_FastCallKeywords (no debug info)

[/Users/woodolee/anaconda3/bin/python] call_function (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyEval_EvalFrameDefault (no debug info)

[/Users/woodolee/anaconda3/bin/python] function_code_fastcall (no debug info)

[/Users/woodolee/anaconda3/bin/python] call_function (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyEval_EvalFrameDefault (no debug info)

[/Users/woodolee/anaconda3/bin/python] function_code_fastcall (no debug info)

[/Users/woodolee/anaconda3/bin/python] call_function (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyEval_EvalFrameDefault (no debug info)

[/Users/woodolee/anaconda3/bin/python] function_code_fastcall (no debug info)

[/Users/woodolee/anaconda3/bin/python] call_function (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyEval_EvalFrameDefault (no debug info)

[/Users/woodolee/anaconda3/bin/python] function_code_fastcall (no debug info)

[/Users/woodolee/anaconda3/bin/python] object_vacall (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyObject_CallMethodIdObjArgs (no debug info)

[/Users/woodolee/anaconda3/bin/python] PyImport_ImportModuleLevelObject (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyEval_EvalFrameDefault (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyEval_EvalCodeWithName (no debug info)

[/Users/woodolee/anaconda3/bin/python] builtin_exec (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyMethodDef_RawFastCallDict (no debug info)

[/Users/woodolee/anaconda3/bin/python] PyCFunction_Call (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyEval_EvalFrameDefault (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyEval_EvalCodeWithName (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyFunction_FastCallKeywords (no debug info)

[/Users/woodolee/anaconda3/bin/python] call_function (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyEval_EvalFrameDefault (no debug info)

[/Users/woodolee/anaconda3/bin/python] function_code_fastcall (no debug info)

[/Users/woodolee/anaconda3/bin/python] call_function (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyEval_EvalFrameDefault (no debug info)

[/Users/woodolee/anaconda3/bin/python] function_code_fastcall (no debug info)

[/Users/woodolee/anaconda3/bin/python] call_function (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyEval_EvalFrameDefault (no debug info)

[/Users/woodolee/anaconda3/bin/python] function_code_fastcall (no debug info)

[/Users/woodolee/anaconda3/bin/python] call_function (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyEval_EvalFrameDefault (no debug info)

[/Users/woodolee/anaconda3/bin/python] function_code_fastcall (no debug info)

[/Users/woodolee/anaconda3/bin/python] object_vacall (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyObject_CallMethodIdObjArgs (no debug info)

[/Users/woodolee/anaconda3/bin/python] PyImport_ImportModuleLevelObject (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyEval_EvalFrameDefault (no debug info)

[/Users/woodolee/anaconda3/bin/python] _PyEval_EvalCodeWithName (no debug info)

[/Users/woodolee/anaconda3/bin/python] PyRun_InteractiveOneObjectEx (no debug info)

[/Users/woodolee/anaconda3/bin/python] PyRun_InteractiveLoopFlags (no debug info)

[/Users/woodolee/anaconda3/bin/python] PyRun_AnyFileExFlags (no debug info)

[/Users/woodolee/anaconda3/bin/python] pymain_main (no debug info)

[/Users/woodolee/anaconda3/bin/python] main (no debug info)

[/usr/lib/system/libdyld.dylib] start (no debug info)

Please read tips for efficient and successful posting and posting code

ROOT Version: Not Provided
Platform: mac os 10.15.2
Compiler: apple clang ? not sure default complier in the mac

lawrenceju · January 7, 2020, 10:40pm

It seems that ROOT was install without using the python from anaconda. First setup anaconda python, then install ROOT. Make sure it picks up the python from anaconda.

system · January 21, 2020, 10:40pm

This topic was automatically closed 14 days after the last reply. New replies are no longer allowed.