/*************************************************************************
 * Author:      Bruce D Pierson                                          *
 * Affiliation: Pacific Northwest National Laboratory                    *
 * E-mail:      bruce.pierson@pnnl.gov                                   *
 *                                                                       *
 * Copyright (C) 1995-2006, Rene Brun and Fons Rademakers.               *
 * All rights reserved.                                                  *
 *                                                                       *
 * For the licensing terms see $ROOTSYS/LICENSE.                         *
 * For the list of contributors see $ROOTSYS/README/CREDITS.             *
 *************************************************************************/

#ifndef ROOT_TListSpectrum
#define ROOT_TListSpectrum

#include "TNamed.h"
#include "TGraph.h"
#include "TTimeStamp.h"
#include "TTree.h"
#include "TFile.h"
#include "TH1D.h"
#include "TH2D.h"
#include "TPolyMarker.h"

#include <fstream>

using namespace std;

class TListSpectrum : public TNamed
{
private:
protected:
public:

	void ProgressBar(clock_t start, ULong64_t filePosition, ULong64_t fileLength, ULong64_t realtime, ULong64_t deadtime);
	TList *ListDirectoryFiles(TString extension, TString directory);
	vector<string> FindinFile(ifstream *input, string search);

	TListSpectrum();
	TListSpectrum(TString fileTitle);
	TListSpectrum(const TListSpectrum&);
	TListSpectrum& operator=(const TListSpectrum&);
	
	Int_t 		kChannels,
				kCombinations;
	
	Double_t	kSampleNorm;
	
	TTimeStamp 	kStartofCounting;
	
	TString 	kGeometry,
				kSampleUnit;
				
// 	TFile		*kListFile;			
	TTree		kListData;
				
	vector<TString>		kDescription,
						kDAQserialnmbr;
				
	vector<Int_t>		kChannelRange,
						kDAQchannelnmbr,
						kWindow_ns,
						kTimePhase_ns,
						kTotalEvents,
						kCoincEvents;
				
	vector<Double_t>	kRealTime_ns,
						kDeadTime_ns,
						kLiveTime_ns;

	vector<TH1D>		kFullSpectrum;
	vector<TH2D>		kTemporalSpectrum,
						kCoincidenceSpectrum;
	vector<TGraph>		kDeadTime;
	
 	vector<Double_t> kEnergyCalibration = vector<Double_t>(3); // this should be in TListSpectrumCal

	void SetChannels();
	void ParseCaenCompassROOT(TString rootFolder, Int_t boardnmbr, Int_t channelnmbr, TString description = "", TString geometry = "", TString type = "UNFILTERED");

	virtual ~TListSpectrum();

	ClassDef(TListSpectrum, 1)
};

#endif