ROOT v6-06-04 on Ubuntu 16.04

[Pepe_Le_Pew]

Here’s my “report” from building ROOT v6-06-04 on Ubuntu 16.04 LTS / x86_64 with gcc 5.3.1 (5.3.1-14ubuntu2.1 20160413) and cmake 3.5.1.

ROOT 6 still cannot stand gcc 5.3.1 so, one needs to set: -DCMAKE_CXX_FLAGS="-D_GLIBCXX_USE_CXX11_ABI=0" which immediately enforces (at the least): -Ddavix="OFF" -Dr="OFF" -Dpythia8="OFF"

Cmake based configurator does not find the installed “iODBC” and one needs to manually set: -DODBC_INCLUDE_DIR="/usr/include/iodbc"

Cmake based configurator does not find the installed “gfal2” and one needs to manually set: -DGFAL_INCLUDE_DIR="/usr/include/gfal2" but then the compilation dies with an error: In file included from /usr/include/gfal2/gfal_api.h:33:0, from /opt/ROOT/build/root-6.06.04/io/gfal/src/TGFALFile.cxx:51: /usr/include/gfal2/global/gfal_global.h:29:18: fatal error: glib.h: No such file or directory compilation terminated. io/gfal/CMakeFiles/GFAL.dir/build.make:99: recipe for target 'io/gfal/CMakeFiles/GFAL.dir/src/TGFALFile.cxx.o' failed make[2]: *** [io/gfal/CMakeFiles/GFAL.dir/src/TGFALFile.cxx.o] Error 1 CMakeFiles/Makefile2:15806: recipe for target 'io/gfal/CMakeFiles/GFAL.dir/all' failed make[1]: *** [io/gfal/CMakeFiles/GFAL.dir/all] Error 2 so, in the end, one needs to enforce: -Dgfal="OFF" Note: the “missing” (?) file is there: /usr/include/glib-2.0/glib.h

The resulting binaries “mostly” work.
The GL (OpenGL) tutorials do NOT work at all, however.
I tried with and without: -Dbuiltin_ftgl="OFF" -Dbuiltin_glew="OFF" and in both cases a canvas is opened but it remains completely white and ROOT hangs … it does not respond to “Ctrl-C”, one needs to “Ctrl-Z” it and then “kill %1”.
Occasionally, instead of the above behaviour, I get: [...]$ root glbox.C root [0] Processing glbox.C... *** Error in `/opt/ROOT/v6-06-04/bin/root.exe': corrupted double-linked list: 0x00000000030f9440 *** ======= Backtrace: ========= /lib/x86_64-linux-gnu/libc.so.6(+0x77725)[0x7f82b9d2c725] /lib/x86_64-linux-gnu/libc.so.6(+0x7e838)[0x7f82b9d33838] /lib/x86_64-linux-gnu/libc.so.6(+0x801e8)[0x7f82b9d351e8] /lib/x86_64-linux-gnu/libc.so.6(cfree+0x4c)[0x7f82b9d38abc] /usr/lib/x86_64-linux-gnu/libLLVM-3.8.so.1(_ZN4llvm16X86TargetMachineD1Ev+0x1f1)[0x7f82a4a87ee1] /usr/lib/x86_64-linux-gnu/libLLVM-3.8.so.1(_ZN4llvm16X86TargetMachineD0Ev+0x9)[0x7f82a4a88229] /usr/lib/x86_64-linux-gnu/libLLVM-3.8.so.1(_ZN4llvm5MCJITD1Ev+0x567)[0x7f82a427bd87] /usr/lib/x86_64-linux-gnu/libLLVM-3.8.so.1(_ZN4llvm5MCJITD0Ev+0x9)[0x7f82a427be59] /usr/lib/x86_64-linux-gnu/dri/swrast_dri.so(+0x412f60)[0x7f82a66f7f60] /usr/lib/x86_64-linux-gnu/dri/swrast_dri.so(+0x6b0a34)[0x7f82a6995a34] /usr/lib/x86_64-linux-gnu/dri/swrast_dri.so(+0x6a9150)[0x7f82a698e150] /usr/lib/x86_64-linux-gnu/dri/swrast_dri.so(+0x6950f6)[0x7f82a697a0f6] /usr/lib/x86_64-linux-gnu/dri/swrast_dri.so(+0x210e77)[0x7f82a64f5e77] /usr/lib/x86_64-linux-gnu/dri/swrast_dri.so(+0x1d9da4)[0x7f82a64beda4] /usr/lib/x86_64-linux-gnu/dri/swrast_dri.so(+0x1bd7ef)[0x7f82a64a27ef] /usr/lib/x86_64-linux-gnu/dri/swrast_dri.so(+0x1bdde6)[0x7f82a64a2de6] /usr/lib/x86_64-linux-gnu/dri/swrast_dri.so(+0x1be373)[0x7f82a64a3373] /usr/lib/x86_64-linux-gnu/dri/swrast_dri.so(+0x1c572f)[0x7f82a64aa72f] /opt/ROOT/v6-06-04/lib/libRGL.so.6.06.04(_ZN3Rgl3Pad13FillAttribSetC2ERKNS0_17PolygonStippleSetEb+0xe6)[0x7f82aa3e6b66] /opt/ROOT/v6-06-04/lib/libRGL.so.6.06.04(_ZN13TGLPadPainter7DrawBoxEddddN18TVirtualPadPainter8EBoxModeE+0x12b)[0x7f82aa393d0b] /opt/ROOT/v6-06-04/lib/libGpad.so.6.06.04(_ZN4TPad8PaintBoxEddddPKc+0x532)[0x7f82ad5ba362] /opt/ROOT/v6-06-04/lib/libGraf.so.6.06.04(_ZN4TBox8PaintBoxEddddPKc+0xb3)[0x7f82ae61d833] /opt/ROOT/v6-06-04/lib/libGraf.so.6.06.04(_ZN5TPave9PaintPaveEddddiPKc+0x124)[0x7f82ae645464] /opt/ROOT/v6-06-04/lib/libGraf.so.6.06.04(_ZN10TPaveLabel14PaintPaveLabelEddddPKcS1_+0x7c)[0x7f82ae66b02c] /opt/ROOT/v6-06-04/lib/libGpad.so.6.06.04(_ZN4TPad5PaintEPKc+0x11c)[0x7f82ad5c689c] /opt/ROOT/v6-06-04/lib/libGpad.so.6.06.04(_ZN7TCanvas5FlushEv+0xae)[0x7f82ad58f28e] /opt/ROOT/v6-06-04/lib/libGpad.so.6.06.04(_ZN7TCanvas6UpdateEv+0x108)[0x7f82ad58f4c8] /opt/ROOT/v6-06-04/lib/libCling.so(_ZN6TCling17UpdateAllCanvasesEv+0x39)[0x7f82b68cfbd9] /opt/ROOT/v6-06-04/lib/libCling.so(_ZN6TCling11ProcessLineEPKcPN12TInterpreter10EErrorCodeE+0xf3)[0x7f82b68d5333] /opt/ROOT/v6-06-04/lib/libCling.so(_ZN6TCling16ProcessLineSynchEPKcPN12TInterpreter10EErrorCodeE+0x87)[0x7f82b68c5a27] /opt/ROOT/v6-06-04/lib/libRint.so.6(_ZN5TRint3RunEb+0x285)[0x7f82bac15cd5] /opt/ROOT/v6-06-04/bin/root.exe(main+0x4c)[0x40107c] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf0)[0x7f82b9cd5830] /opt/ROOT/v6-06-04/bin/root.exe(_start+0x29)[0x4010d9] ======= Memory map: ======== 00400000-00402000 r-xp 00000000 08:01 4743288 /opt/ROOT/v6-06-04/bin/root.exe 00601000-00602000 r--p 00001000 08:01 4743288 /opt/ROOT/v6-06-04/bin/root.exe 00602000-00603000 rw-p 00002000 08:01 4743288 /opt/ROOT/v6-06-04/bin/root.exe 0112f000-0328a000 rw-p 00000000 00:00 0 [heap] 7f8294000000-7f8294021000 rw-p 00000000 00:00 0 7f8294021000-7f8298000000 ---p 00000000 00:00 0 7f829a5b8000-7f829a841000 rw-p 00000000 00:00 0 7f829a841000-7f829a878000 r-xp 00000000 08:01 796106 /usr/lib/x86_64-linux-gnu/libtxc_dxtn_s2tc.so.0.0.0 7f829a878000-7f829aa77000 ---p 00037000 08:01 796106 /usr/lib/x86_64-linux-gnu/libtxc_dxtn_s2tc.so.0.0.0 7f829aa77000-7f829aa78000 r--p 00036000 08:01 796106 /usr/lib/x86_64-linux-gnu/libtxc_dxtn_s2tc.so.0.0.0 7f829aa78000-7f829aa79000 rw-p 00037000 08:01 796106 /usr/lib/x86_64-linux-gnu/libtxc_dxtn_s2tc.so.0.0.0 7f829aa79000-7f829aa7a000 ---p 00000000 00:00 0 7f829aa7a000-7f829b27a000 rw-p 00000000 00:00 0 7f829b27a000-7f829b27b000 ---p 00000000 00:00 0 7f829b27b000-7f829ba7b000 rw-p 00000000 00:00 0 7f829ba7b000-7f829ba7c000 ---p 00000000 00:00 0 7f829ba7c000-7f829c27c000 rw-p 00000000 00:00 0 7f829c27c000-7f829c27d000 ---p 00000000 00:00 0 7f829c27d000-7f829ca7d000 rw-p 00000000 00:00 0 7f829ca7d000-7f829ca7e000 ---p 00000000 00:00 0 7f829ca7e000-7f829d27e000 rw-p 00000000 00:00 0 7f829d27e000-7f829d27f000 ---p 00000000 00:00 0 7f829d27f000-7f829da7f000 rw-p 00000000 00:00 0 7f829da7f000-7f829da80000 ---p 00000000 00:00 0 7f829da80000-7f829e280000 rw-p 00000000 00:00 0 7f829e280000-7f829e281000 ---p 00000000 00:00 0 7f829e281000-7f829ea81000 rw-p 00000000 00:00 0 7f829ea81000-7f829ea82000 ---p 00000000 00:00 0 7f829ea82000-7f829f282000 rw-p 00000000 00:00 0 7f829f282000-7f829f283000 ---p 00000000 00:00 0 7f829f283000-7f829fa83000 rw-p 00000000 00:00 0 7f829fa83000-7f829fa84000 ---p 00000000 00:00 0 7f829fa84000-7f82a0284000 rw-p 00000000 00:00 0 7f82a0284000-7f82a0285000 ---p 00000000 00:00 0 7f82a0285000-7f82a0a85000 rw-p 00000000 00:00 0 7f82a0a85000-7f82a0a86000 ---p 00000000 00:00 0 7f82a0a86000-7f82a1286000 rw-p 00000000 00:00 0 7f82a1286000-7f82a1287000 ---p 00000000 00:00 0 7f82a1287000-7f82a1a87000 rw-p 00000000 00:00 0 7f82a1a87000-7f82a1a88000 ---p 00000000 00:00 0 7f82a1a88000-7f82a2288000 rw-p 00000000 00:00 0 7f82a2288000-7f82a2289000 ---p 00000000 00:00 0 7f82a2289000-7f82a2a89000 rw-p 00000000 00:00 0 7f82a2a89000-7f82a2a9c000 r-xp 00000000 08:01 4068120 /lib/x86_64-linux-gnu/libbsd.so.0.8.2 7f82a2a9c000-7f82a2c9b000 ---p 00013000 08:01 4068120 /lib/x86_64-linux-gnu/libbsd.so.0.8.2 7f82a2c9b000-7f82a2c9c000 r--p 00012000 08:01 4068120 /lib/x86_64-linux-gnu/libbsd.so.0.8.2 7f82a2c9c000-7f82a2c9d000 rw-p 00013000 08:01 4068120 /lib/x86_64-linux-gnu/libbsd.so.0.8.2 7f82a2c9d000-7f82a2c9e000 rw-p 00000000 00:00 0 7f82a2c9e000-7f82a2ccf000 r-xp 00000000 08:01 795255 /usr/lib/x86_64-linux-gnu/libedit.so.2.0.53 7f82a2ccf000-7f82a2ecf000 ---p 00031000 08:01 795255 /usr/lib/x86_64-linux-gnu/libedit.so.2.0.53 7f82a2ecf000-7f82a2ed1000 r--p 00031000 08:01 795255 /usr/lib/x86_64-linux-gnu/libedit.so.2.0.53 7f82a2ed1000-7f82a2ed2000 rw-p 00033000 08:01 795255 /usr/lib/x86_64-linux-gnu/libedit.so.2.0.53 7f82a2ed2000-7f82a2ed6000 rw-p 00000000 00:00 0 7f82a2ed6000-7f82a2edd000 r-xp 00000000 08:01 795303 /usr/lib/x86_64-linux-gnu/libffi.so.6.0.4 7f82a2edd000-7f82a30dc000 ---p 00007000 08:01 795303 /usr/lib/x86_64-linux-gnu/libffi.so.6.0.4 7f82a30dc000-7f82a30dd000 r--p 00006000 08:01 795303 /usr/lib/x86_64-linux-gnu/libffi.so.6.0.4 7f82a30dd000-7f82a30de000 rw-p 00007000 08:01 795303 /usr/lib/x86_64-linux-gnu/libffi.so.6.0.4 7f82a30de000-7f82a55d0000 r-xp 00000000 08:01 786896 /usr/lib/x86_64-linux-gnu/libLLVM-3.8.so.1 7f82a55d0000-7f82a57d0000 ---p 024f2000 08:01 786896 /usr/lib/x86_64-linux-gnu/libLLVM-3.8.so.1 7f82a57d0000-7f82a5a85000 r--p 024f2000 08:01 786896 /usr/lib/x86_64-linux-gnu/libLLVM-3.8.so.1 7f82a5a85000-7f82a5a87000 rw-p 027a7000 08:01 786896 /usr/lib/x86_64-linux-gnu/libLLVM-3.8.so.1 7f82a5a87000-7f82a5ab1000 rw-p 00000000 00:00 0 7f82a5ab1000-7f82a5ac8000 r-xp 00000000 08:01 795260 /usr/lib/x86_64-linux-gnu/libelf-0.165.so 7f82a5ac8000-7f82a5cc7000 ---p 00017000 08:01 795260 /usr/lib/x86_64-linux-gnu/libelf-0.165.so 7f82a5cc7000-7f82a5cc8000 r--p 00016000 08:01 795260 /usr/lib/x86_64-linux-gnu/libelf-0.165.so 7f82a5cc8000-7f82a5cc9000 rw-p 00017000 08:01 795260 /usr/lib/x86_64-linux-gnu/libelf-0.165.so 7f82a5cc9000-7f82a5cd0000 r-xp 00000000 08:01 791883 /usr/lib/x86_64-linux-gnu/libdrm_amdgpu.so.1.0.0 7f82a5cd0000-7f82a5ecf000 ---p 00007000 08:01 791883 /usr/lib/x86_64-linux-gnu/libdrm_amdgpu.so.1.0.0 7f82a5ecf000-7f82a5ed0000 r--p 00006000 08:01 791883 /usr/lib/x86_64-linux-gnu/libdrm_amdgpu.so.1.0.0 7f82a5ed0000-7f82a5ed1000 rw-p 00007000 08:01 791883 /usr/lib/x86_64-linux-gnu/libdrm_amdgpu.so.1.0.0 7f82a5ed1000-7f82a5edc000 r-xp 00000000 08:01 791890 /usr/lib/x86_64-linux-gnu/libdrm_radeon.so.1.0.1 7f82a5edc000-7f82a60db000 ---p 0000b000 08:01 791890 /usr/lib/x86_64-linux-gnu/libdrm_radeon.so.1.0.1 7f82a60db000-7f82a60dc000 r--p 0000a000 08:01 791890 /usr/lib/x86_64-linux-gnu/libdrm_radeon.so.1.0.1 7f82a60dc000-7f82a60dd000 rw-p 0000b000 08:01 791890 /usr/lib/x86_64-linux-gnu/libdrm_radeon.so.1.0.1 7f82a60dd000-7f82a60e4000 r-xp 00000000 08:01 791887 /usr/lib/x86_64-linux-gnu/libdrm_nouveau.so.2.0.0 7f82a60e4000-7f82a62e3000 ---p 00007000 08:01 791887 /usr/lib/x86_64-linux-gnu/libdrm_nouveau.so.2.0.0 7f82a62e3000-7f82a62e4000 r--p 00006000 08:01 791887 /usr/lib/x86_64-linux-gnu/libdrm_nouveau.so.2.0.0 7f82a62e4000-7f82a62e5000 rw-p 00007000 08:01 791887 /usr/lib/x86_64-linux-gnu/libdrm_nouveau.so.2.0.0 7f82a62e5000-7f82a6bac000 r-xp 00000000 08:01 1050909 /usr/lib/x86_64-linux-gnu/dri/swrast_dri.so 7f82a6bac000-7f82a6dab000 ---p 008c7000 08:01 1050909 /usr/lib/x86_64-linux-gnu/dri/swrast_dri.so 7f82a6dab000-7f82a6e1f000 r--p 008c6000 08:01 1050909 /usr/lib/x86_64-linux-gnu/dri/swrast_dri.so 7f82a6e1f000-7f82a6e2e000 rw-p 0093a000 08:01 1050909 /usr/lib/x86_64-linux-gnu/dri/swrast_dri.so 7f82a6e2e000-7f82a7024000 rw-p 00000000 00:00 0 7f82a7024000-7f82a7253000 r-xp 00000000 08:01 4064551 /lib/x86_64-linux-gnu/libcrypto.so.1.0.0 7f82a7253000-7f82a7452000 ---p 0022f000 08:01 4064551 /lib/x86_64-linux-gnu/libcrypto.so.1.0.0 7f82a7452000-7f82a746e000 r--p 0022e000 08:01 4064551 /lib/x86_64-linux-gnu/libcrypto.so.1.0.0 7f82a746e000-7f82a747b000 rw-p 0024a000 08:01 4064551 /lib/x86_64-linux-gnu/libcrypto.so.1.0.0 7f82a747b000-7f82a747f000 rw-p 00000000 00:00 0 7f82a747f000-7f82a74de000 r-xp 00000000 08:01 4064552 /lib/x86_64-linux-gnu/libssl.so.1.0.0 7f82a74de000-7f82a76dd000 ---p 0005f000 08:01 4064552 /lib/x86_64-linux-gnu/libssl.so.1.0.0 7f82a76dd000-7f82a76e1000 r--p 0005e000 08:01 4064552 /lib/x86_64-linux-gnu/libssl.so.1.0.0 7f82a76e1000-7f82a76e8000 rw-p 00062000 08:01 4064552 /lib/x86_64-linux-gnu/libssl.so.1.0.0 7f82a76e8000-7f82a779b000 r-xp 00000000 08:01 5638760 /opt/ROOT/v6-06-04/lib/libNet.so.6.06.04 7f82a779b000-7f82a799b000 ---p 000b3000 08:01 5638760 /opt/ROOT/v6-06-04/lib/libNet.so.6.06.04 7f82a799b000-7f82a79a6000 r--p 000b3000 08:01 5638760 /opt/ROOT/v6-06-04/lib/libNet.so.6.06.04 7f82a79a6000-7f82a79a8000 rw-p 000be000 08:01 5638760 /opt/ROOT/v6-06-04/lib/libNet.so.6.06.04 7f82a79a8000-7f82a79af000 rw-p 00000000 00:00 0 7f82a79af000-7f82a79bd000 r-xp 00000000 08:01 786543 /usr/lib/x86_64-linux-gnu/libdrm.so.2.4.0 7f82a79bd000-7f82a7bbc000 ---p 0000e000 08:01 786543 /usr/lib/x86_64-linux-gnu/libdrm.so.2.4.0 7f82a7bbc000-7f82a7bbd000 r--p 0000d000 08:01 786543 /usr/lib/x86_64-linux-gnu/libdrm.so.2.4.0 7f82a7bbd000-7f82a7bbe000 rw-p 0000e000 08:01 786543 /usr/lib/x86_64-linux-gnu/libdrm.so.2.4.0 7f82a7bbe000-7f82a7bc3000 r-xp 00000000 08:01 794970 /usr/lib/x86_64-linux-gnu/libXxf86vm.so.1.0.0 7f82a7bc3000-7f82a7dc2000 ---p 00005000 08:01 794970 /usr/lib/x86_64-linux-gnu/libXxf86vm.so.1.0.0 7f82a7dc2000-7f82a7dc3000 r--p 00004000 08:01 794970 /usr/lib/x86_64-linux-gnu/libXxf86vm.so.1.0.0 7f82a7dc3000-7f82a7dc4000 rw-p 00005000 08:01 794970 /usr/lib/x86_64-linux-gnu/libXxf86vm.so.1.0.0 7f82a7dc4000-7f82a7dc8000 r-xp 00000000 08:01 796267 /usr/lib/x86_64-linux-gnu/libxcb-dri2.so.0.0.0 7f82a7dc8000-7f82a7fc7000 ---p 00004000 08:01 796267 /usr/lib/x86_64-linux-gnu/libxcb-dri2.so.0.0.0 7f82a7fc7000-7f82a7fc8000 r--p 00003000 08:01 796267 /usr/lib/x86_64-linux-gnu/libxcb-dri2.so.0.0.0 7f82a7fc8000-7f82a7fc9000 rw-p 00004000 08:01 796267 /usr/lib/x86_64-linux-gnu/libxcb-dri2.so.0.0.0 7f82a7fc9000-7f82a7fe0000 r-xp 00000000 08:01 796271 /usr/lib/x86_64-linux-gnu/libxcb-glx.so.0.0.0 7f82a7fe0000-7f82a81df000 ---p 00017000 08:01 796271 /usr/lib/x86_64-linux-gnu/libxcb-glx.so.0.0.0 7f82a81df000-7f82a81e1000 r--p 00016000 08:01 796271 /usr/lib/x86_64-linux-gnu/libxcb-glx.so.0.0.0 7f82a81e1000-7f82a81e2000 rw-p 00018000 08:01 796271 /usr/lib/x86_64-linux-gnu/libxcb-glx.so.0.0.0 7f82a81e2000-7f82a81e3000 r-xp 00000000 08:01 794915 /usr/lib/x86_64-linux-gnu/libX11-xcb.so.1.0.0 7f82a81e3000-7f82a83e2000 ---p 00001000 08:01 794915 /usr/lib/x86_64-linux-gnu/libX11-xcb.so.1.0.0 7f82a83e2000-7f82a83e3000 r--p 00000000 08:01 794915 /usr/lib/x86_64-linux-gnu/libX11-xcb.so.1.0.0 7f82a83e3000-7f82a83e4000 rw-p 00001000 08:01 794915 /usr/lib/x86_64-linux-gnu/libX11-xcb.so.1.0.0 7f82a83e4000-7f82a83e6000 r-xp 00000000 08:01 794930 /usr/lib/x86_64-linux-gnu/libXdamage.so.1.1.0 7f82a83e6000-7f82a85e5000 ---p 00002000 08:01 794930 /usr/lib/x86_64-linux-gnu/libXdamage.so.1.1.0 7f82a85e5000-7f82a85e6000 r--p 00001000 08:01 794930 /usr/lib/x86_64-linux-gnu/libXdamage.so.1.1.0 7f82a85e6000-7f82a85e7000 rw-p 00002000 08:01 794930 /usr/lib/x86_64-linux-gnu/libXdamage.so.1.1.0 7f82a85e7000-7f82a8610000 r-xp 00000000 08:01 795426 /usr/lib/x86_64-linux-gnu/libglapi.so.0.0.0 7f82a8610000-7f82a880f000 ---p 00029000 08:01 795426 /usr/lib/x86_64-linux-gnu/libglapi.so.0.0.0 7f82a880f000-7f82a8813000 r--p 00028000 08:01 795426 /usr/lib/x86_64-linux-gnu/libglapi.so.0.0.0 7f82a8813000-7f82a8814000 rw-p 0002c000 08:01 795426 /usr/lib/x86_64-linux-gnu/libglapi.so.0.0.0 7f82a8814000-7f82a8815000 rw-p 00000000 00:00 0 7f82a8815000-7f82a8816000 r-xp 00000000 08:01 796311 /usr/lib/x86_64-linux-gnu/libxshmfence.so.1.0.0 7f82a8816000-7f82a8a16000 ---p 00001000 08:01 796311 /usr/lib/x86_64-linux-gnu/libxshmfence.so.1.0.0 7f82a8a16000-7f82a8a17000 r--p 00001000 08:01 796311 /usr/lib/x86_64-linux-gnu/libxshmfence.so.1.0.0 7f82a8a17000-7f82a8a18000 rw-p 00002000 08:01 796311 /usr/lib/x86_64-linux-gnu/libxshmfence.so.1.0.0 7f82a8a18000-7f82a8a1d000 r-xp 00000000 08:01 796291 /usr/lib/x86_64-linux-gnu/libxcb-sync.so.1.0.0 7f82a8a1d000-7f82a8c1d000 ---p 00005000 08:01 796291 /usr/lib/x86_64-linux-gnu/libxcb-sync.so.1.0.0 7f82a8c1d000-7f82a8c1e000 r--p 00005000 08:01 796291 /usr/lib/x86_64-linux-gnu/libxcb-sync.so.1.0.0 7f82a8c1e000-7f82a8c1f000 rw-p 00006000 08:01 796291 /usr/lib/x86_64-linux-gnu/libxcb-sync.so.1.0.0 7f82a8c1f000-7f82a8c21000 r-xp 00000000 08:01 796279 /usr/lib/x86_64-linux-gnu/libxcb-present.so.0.0.0 7f82a8c21000-7f82a8e20000 ---p 00002000 08:01 796279 /usr/lib/x86_64-linux-gnu/libxcb-present.so.0.0.0 7f82a8e20000-7f82a8e21000 r--p 00001000 08:01 796279 /usr/lib/x86_64-linux-gnu/libxcb-present.so.0.0.0 7f82a8e21000-7f82a8e22000 rw-p 00002000 08:01 796279 /usr/lib/x86_64-linux-gnu/libxcb-present.so.0.0.0 7f82a8e22000-7f82a8e24000 r-xp 00000000 08:01 796269 /usr/lib/x86_64-linux-gnu/libxcb-dri3.so.0.0.0 7f82a8e24000-7f82a9023000 ---p 00002000 08:01 796269 /usr/lib/x86_64-linux-gnu/libxcb-dri3.so.0.0.0 7f82a9023000-7f82a9024000 r--p 00001000 08:01 796269 /usr/lib/x86_64-linux-gnu/libxcb-dri3.so.0.0.0 7f82a9024000-7f82a9025000 rw-p 00002000 08:01 796269 /usr/lib/x86_64-linux-gnu/libxcb-dri3.so.0.0.0 7f82a9025000-7f82a90af000 r-xp 00000000 08:01 5638852 /opt/ROOT/v6-06-04/lib/libGraf3d.so.6.06.04 7f82a90af000-7f82a92af000 ---p 0008a000 08:01 5638852 /opt/ROOT/v6-06-04/lib/libGraf3d.so.6.06.04 7f82a92af000-7f82a92b8000 r--p 0008a000 08:01 5638852 /opt/ROOT/v6-06-04/lib/libGraf3d.so.6.06.04 7f82a92b8000-7f82a92ba000 rw-p 00093000 08:01 5638852 /opt/ROOT/v6-06-04/lib/libGraf3d.so.6.06.04 7f82a92ba000-7f82a92be000 rw-p 00000000 00:00 0 7f82a92be000-7f82a93ee000 r-xp 00000000 08:01 5638720 /opt/ROOT/v6-06-04/lib/libTree.so.6.06.04 7f82a93ee000-7f82a95ee000 ---p 00130000 08:01 5638720 /opt/ROOT/v6-06-04/lib/libTree.so.6.06.04 7f82a95ee000-7f82a95fc000 r--p 00130000 08:01 5638720 /opt/ROOT/v6-06-04/lib/libTree.so.6.06.04 7f82a95fc000-7f82a95ff000 rw-p 0013e000 08:01 5638720 /opt/ROOT/v6-06-04/lib/libTree.so.6.06.04 7f82a95ff000-7f82a9603000 rw-p 00000000 00:00 0 7f82a9603000-7f82a9718000 r-xp 00000000 08:01 5638892 /opt/ROOT/v6-06-04/lib/libGed.so.6.06.04 7f82a9718000-7f82a9918000 ---p 00115000 08:01 5638892 /opt/ROOT/v6-06-04/lib/libGed.so.6.06.04 7f82a9918000-7f82a9928000 r--p 00115000 08:01 5638892 /opt/ROOT/v6-06-04/lib/libGed.so.6.06.04 7f82a9928000-7f82a992a000 rw-p 00125000 08:01 5638892 /opt/ROOT/v6-06-04/lib/libGed.so.6.06.04 7f82a992a000-7f82a992d000 rw-p 00000000 00:00 0 7f82a992d000-7f82a993f000 r-xp 00000000 08:01 5638877 /opt/ROOT/v6-06-04/lib/libFTGL.so.6.06.04 7f82a993f000-7f82a9b3e000 ---p 00012000 08:01 5638877 /opt/ROOT/v6-06-04/lib/libFTGL.so.6.06.04 7f82a9b3e000-7f82a9b3f000 r--p 00011000 08:01 5638877 /opt/ROOT/v6-06-04/lib/libFTGL.so.6.06.04 7f82a9b3f000-7f82a9b40000 rw-p 00012000 08:01 5638877 /opt/ROOT/v6-06-04/lib/libFTGL.so.6.06.04 7f82a9b40000-7f82a9b88000 r-xp 00000000 08:01 5638870 /opt/ROOT/v6-06-04/lib/libGLEW.so.6.06.04 7f82a9b88000-7f82a9d88000 ---p 00048000 08:01 5638870 /opt/ROOT/v6-06-04/lib/libGLEW.so.6.06.04 7f82a9d88000-7f82a9d8c000 r--p 00048000 08:01 5638870 /opt/ROOT/v6-06-04/lib/libGLEW.so.6.06.04 7f82a9d8c000-7f82a9d8d000 rw-p 0004c000 08:01 5638870 /opt/ROOT/v6-06-04/lib/libGLEW.so.6.06.04 7f82a9d8d000-7f82a9d90000 rw-p 00000000 00:00 0 7f82a9d90000-7f82a9dfd000 r-xp 00000000 08:01 1052284 /usr/lib/x86_64-linux-gnu/mesa/libGL.so.1.2.0 7f82a9dfd000-7f82a9ffc000 ---p 0006d000 08:01 1052284 /usr/lib/x86_64-linux-gnu/mesa/libGL.so.1.2.0 7f82a9ffc000-7f82a9fff000 r--p 0006c000 08:01 1052284 /usr/lib/x86_64-linux-gnu/mesa/libGL.so.1.2.0 7f82a9fff000-7f82aa000000 rw-p 0006f000 08:01 1052284 /usr/lib/x86_64-linux-gnu/mesa/libGL.so.1.2.0 7f82aa000000-7f82aa001000 rw-p 00000000 00:00 0 7f82aa001000-7f82aa06e000 r-xp 00000000 08:01 794779 /usr/lib/x86_64-linux-gnu/libGLU.so.1.3.1 7f82aa06e000-7f82aa26e000 ---p 0006d000 08:01 794779 /usr/lib/x86_64-linux-gnu/libGLU.so.1.3.1 7f82aa26e000-7f82aa26f000 r--p 0006d000 08:01 794779 /usr/lib/x86_64-linux-gnu/libGLU.so.1.3.1 7f82aa26f000-7f82aa270000 rw-p 0006e000 08:01 794779 /usr/lib/x86_64-linux-gnu/libGLU.so.1.3.1 7f82aa291000-7f82aa292000 rw-p 00000000 00:00 0 7f82aa292000-7f82aa299000 r-xp 00000000 00:00 0 7f82aa299000-7f82aa4b4000 r-xp 00000000 08:01 5638867 /opt/ROOT/v6-06-04/lib/libRGL.so.6.06.04 7f82aa4b4000-7f82aa6b3000 ---p 0021b000 08:01 5638867 /opt/ROOT/v6-06-04/lib/libRGL.so.6.06.04 7f82aa6b3000-7f82aa6c3000 r--p 0021a000 08:01 5638867 /opt/ROOT/v6-06-04/lib/libRGL.so.6.06.04 7f82aa6c3000-7f82aa6c8000 rw-p 0022a000 08:01 5638867 /opt/ROOT/v6-06-04/lib/libRGL.so.6.06.04 7f82aa6c8000-7f82aa6d2000 rw-p 00000000 00:00 0 7f82aa6d2000-7f82aa6dd000 r-xp 00000000 08:01 795650 /usr/lib/x86_64-linux-gnu/libjbig.so.0 7f82aa6dd000-7f82aa8dc000 ---p 0000b000 08:01 795650 /usr/lib/x86_64-linux-gnu/libjbig.so.0 7f82aa8dc000-7f82aa8dd000 r--p 0000a000 08:01 795650 /usr/lib/x86_64-linux-gnu/libjbig.so.0 7f82aa8dd000-7f82aa8e0000 rw-p 0000b000 08:01 795650 /usr/lib/x86_64-linux-gnu/libjbig.so.0 7f82aa8e0000-7f82aa937000 r-xp 00000000 08:01 795654 /usr/lib/x86_64-linux-gnu/libjpeg.so.8.0.2 7f82aa937000-7f82aab37000 ---p 00057000 08:01 795654 /usr/lib/x86_64-linux-gnu/libjpeg.so.8.0.2 7f82aab37000-7f82aab38000 r--p 00057000 08:01 795654 /usr/lib/x86_64-linux-gnu/libjpeg.so.8.0.2 7f82aab38000-7f82aab39000 rw-p 00058000 08:01 795654 /usr/lib/x86_64-linux-gnu/libjpeg.so.8.0.2 7f82aab39000-7f82aaba8000 r-xp 00000000 08:01 796088 /usr/lib/x86_64-linux-gnu/libtiff.so.5.2.4 7f82aaba8000-7f82aada8000 ---p 0006f000 08:01 796088 /usr/lib/x86_64-linux-gnu/libtiff.so.5.2.4 7f82aada8000-7f82aada9000 r--p 0006f000 08:01 796088 /usr/lib/x86_64-linux-gnu/libtiff.so.5.2.4 7f82aada9000-7f82aadac000 rw-p 00070000 08:01 796088 /usr/lib/x86_64-linux-gnu/libtiff.so.5.2.4 7f82aadac000-7f82aadd5000 r-xp 00000000 00:00 0 7f82aadd5000-7f82aae83000 r-xp 00000000 08:01 5638827 /opt/ROOT/v6-06-04/lib/libASImage.so.6.06.04 7f82aae83000-7f82ab082000 ---p 000ae000 08:01 5638827 /opt/ROOT/v6-06-04/lib/libASImage.so.6.06.04 7f82ab082000-7f82ab085000 r--p 000ad000 08:01 5638827 /opt/ROOT/v6-06-04/lib/libASImage.so.6.06.04 7f82ab085000-7f82ab088000 rw-p 000b0000 08:01 5638827 /opt/ROOT/v6-06-04/lib/libASImage.so.6.06.04 7f82ab088000-7f82ab096000 rw-p 00000000 00:00 0 7f82ab096000-7f82ab097000 r-xp 00000000 00:00 0 7f82ab097000-7f82ab0a7000 r--p 00000000 08:01 1579379 /usr/share/texlive/texmf-dist/fonts/type1/adobe/courier/pcrr8a.pfb 7f82ab0a7000-7f82ab0b9000 r--p 00000000 08:01 1707326 /usr/share/fonts/type1/gsfonts/n019004l.pfb 7f82ab0b9000-7f82ab0cd000 r--p 00000000 08:01 1707323 /usr/share/fonts/type1/gsfonts/n019003l.pfb 7f82ab0cd000-7f82ab0d2000 r-xp 00000000 08:01 794936 /usr/lib/x86_64-linux-gnu/libXfixes.so.3.1.0 7f82ab0d2000-7f82ab2d1000 ---p 00005000 08:01 794936 /usr/lib/x86_64-linux-gnu/libXfixes.so.3.1.0 7f82ab2d1000-7f82ab2d2000 r--p 00004000 08:01 794936 /usr/lib/x86_64-linux-gnu/libXfixes.so.3.1.0 7f82ab2d2000-7f82ab2d3000 rw-p 00005000 08:01 794936 /usr/lib/x86_64-linux-gnu/libXfixes.so.3.1.0 7f82ab2d3000-7f82ab2dc000 r-xp 00000000 08:01 794928 /usr/lib/x86_64-linux-gnu/libXcursor.so.1.0.2 7f82ab2dc000-7f82ab4db000 ---p 00009000 08:01 794928 /usr/lib/x86_64-linux-gnu/libXcursor.so.1.0.2 7f82ab4db000-7f82ab4dc000 r--p 00008000 08:01 794928 /usr/lib/x86_64-linux-gnu/libXcursor.so.1.0.2 7f82ab4dc000-7f82ab4dd000 rw-p 00009000 08:01 794928 /usr/lib/x86_64-linux-gnu/libXcursor.so.1.0.2 [...]$

Please fix the reported problems.

[ferhue]

An alternative way (workaround in the meantime) would be to downgrade gcc:

ROOTaaS C++ kernel sdtout or stderr malformed message with zmq

Ok, I managed to build ROOT6 master (6.07.03) in Debian stretch (sid), by downgrading first the default gcc compiler (5.3) to 4.8. Now all error messages about ABIs, zmq and so on have disappeared. I did this with the update-alternatives method described here: http://askubuntu.com/a/26518. I post the complete workflow, in case someone has the same problem. sudo apt-get install git dpkg-dev make g++ gcc binutils libx11-dev libxpm-dev \ libxft-dev libxext-dev sudo apt-get install gfortran libssl…

[Pepe_Le_Pew]

[quote=“ferhue”]An alternative way (workaround in the meantime) would be to downgrade gcc:[/quote] I’m not that stupid.

[Axel]

Hi,

Regarding the OpenGL issue: dri/swrast_dri.so points to Freedesktop.org - they had a problem with not hiding llvm’s symbols, polluting everything that depends on llvm. For now there are two ways out:

• hope that they fixed it in a newer version (from what I heard, that was their plan)
• use a different graphics driver.

I know, none of that is very nice, but I don’t know what we can do to fix this on our side… It’d not even cling’s JIT that is suffering from it (and where we could tweak the symbol resolution sequence) - this is the dynamic linker being confused by Freedesktop.org’s use of llvm. There are several report out there regarding this exact same issue…

For the rest I’ll send a note to Pere who maintains our CMake system.

Cheers, Axel.

[mato]

Dear Pepe,

Thanks for the report. I have committed some fixes for ODBC and GFAL build problems in 6.06 and master branches. See details at github.com/root-mirror/root/com … 40cc442bac
It is not yet perfect, since it still requires to locate the file glibconfig.h, which is ‘hidden’ in /usr/lib/x86_64-linux-gnu/glib-2.0/include. I do not know of a clean solution within CMake. For the time being I have copied/linked it to /usr/include/glib-2.0

Concerning the problem with running the tutorial glbox.C I can reproduce it. We will investigate.

Pere

[Pepe_Le_Pew]

What concerns “gfal”, attached is a small file which patches the “io/gfal/src/TGFALFile.cxx” file (note that the same patch allowed me to [url=https://root-forum.cern.ch/t/root-v5-34-00-patches-and-v5-34-36-on-ubuntu-16-04/21326/3 “gfal” in “v5-34-00-patches”[/url] using the “configure” based method).

However, in “cmake” based ROOT 6 configuration, this is still not all that is needed … you need to add “include paths”, as it is currently done in the “configure” script (do not copy nor link “glib.h”, just add the proper “include paths”): # check if we have pkg-config glib2incdir= if `$cwhich pkg-config > /dev/null 2>&1` ; then if pkg-config --exists glib-2.0 ; then glib2incdir=`pkg-config --cflags-only-I glib-2.0 | sed 's/-I//g'` fi fi Unfortunately, it seems that “cmake” based configurator does not provide anything like “–with-glib2-incdir=…”.
I tried to run the “cmake” based configurator adding: -Dglib2incdir="`pkg-config --cflags-only-I glib-2.0 | sed 's/-I//g'`" and: -DGLIB2INCDIR="`pkg-config --cflags-only-I glib-2.0 | sed 's/-I//g'`" but it didn’t work.
One actually needs to set “@glib2incdir@” which is used by “config/Makefile.in” and then “config/Makefile.config”, so I assume that one needs to add an appropriate line in the “cmake/modules/RootConfiguration.cmake” file … right after all existing “gfal” related entries, something like: set(glib2incdir ${GLIB2INCDIR})

What concerns, llvm/clang based OpenGL drivers … to the best of my knowledge … this was fixed a long time ago in ROOT 6 (all symbols coming from llvm/clang OpenGL were “hidden” in ROOT 6).
root-6.06.04.2016.06.16.17.40.tar.gz (4.04 KB)

[Pepe_Le_Pew]

I think I need to report another problem (note: I configured it with “-Dcxx14=ON”, if it matters).

It looks like the “-D_GLIBCXX_USE_CXX11_ABI=0” is not “propagated” at all.
It should automatically be present in “root-config --cflags” but it isn’t.

As a result, it seems that none of the “test” executables can be built.
I always get the same errror: c++ -O2 -Wall -fPIC -pthread -std=c++1y -Wno-deprecated-declarations -m64 -I/opt/ROOT/v6-06-04/include -c Event.cxx Generating dictionary EventDict.cxx... rootcling -f EventDict.cxx -c Event.h EventLinkDef.h c++ -O2 -Wall -fPIC -pthread -std=c++1y -Wno-deprecated-declarations -m64 -I/opt/ROOT/v6-06-04/include -c EventDict.cxx c++ -shared -O2 -m64 Event.o EventDict.o -o libEvent.so libEvent.so done c++ -O2 -Wall -fPIC -pthread -std=c++1y -Wno-deprecated-declarations -m64 -I/opt/ROOT/v6-06-04/include -c MainEvent.cxx c++ -O2 -m64 MainEvent.o Event.o EventDict.o -L/opt/ROOT/v6-06-04/lib -lCore -lRIO -lNet -lHist -lGraf -lGraf3d -lGpad -lTree -lRint -lPostscript -lMatrix -lPhysics -lMathCore -lThread -lMultiProc -pthread -lm -ldl -rdynamic -o Event EventDict.o: In function `(anonymous namespace)::TriggerDictionaryInitialization_EventDict_Impl()': EventDict.cxx:(.text+0xd00): undefined reference to `TROOT::RegisterModule(char const*, char const**, char const**, char const*, char const*, void (*)(), std::vector<std::pair<std::__cxx11::basic_string<char, std::char_traits<char>, std: :allocator<char> >, int>, std::allocator<std::pair<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, int> > > const&, char const**)' collect2: error: ld returned 1 exit status Makefile:396: recipe for target 'Event' failed make: *** [Event] Error 1

[Axel]

I have opened sft.its.cern.ch/jira/browse/ROOT-8231

Thanks for the report, Pepe!

Axel.

[mato]

What concerns “gfal”, attached is a small file which patches the “io/gfal/src/TGFALFile.cxx” file (note that the same patch allowed me to build “gfal” in “v5-34-00-patches” using the “configure” based method).

I did already fix by defining the macro GFAL2_API to the compilation.

However, in “cmake” based ROOT 6 configuration, this is still not all that is needed … you need to add “include paths”, as it is currently done in the “configure” script (do not copy nor link “glib.h”, just add the proper “include paths”):

Yes I know. The problem is that calling pkg-config --cflags-only-I glib-2.0 | sed ‘s/-I//g’ will only work for system installations of glib-2.0. In any case, since it seems to be the only way to discover where the file glibconfig.h is located I will implement it to the CMake part.

[mato]

I have committed a fix to use pkg-config to get glib-2.0 include dirrecoties. I hope this solves the problem of building with gfal2.

[Pepe_Le_Pew]

See my notes about “GFAL2_API” usage (please fix the “gfal2” related problem): ROOT v5-34-00-patches and v5-34-36 on Ubuntu 16.04

[mato]

It should be fixed now following your suggestions.

[Pepe_Le_Pew]

I can confirm that the reported problems (i.e. “odbc”, “gfal”, “opengl”, and the not “propagated” “-D_GLIBCXX_USE_CXX11_ABI=0”) are solved in ROOT 6.06/06 (v6-06-06).
Everything builds smoothly now (on both, Ubuntu 14.04.4 and 16.04 / both x86_64).