Bin/rmkdepend: Command not found

pegasusmd · June 27, 2008, 3:56pm

Hi all,
There is an error when I’m trying to install ROOT 5.20 .

After typing ‘make’ :
make: bin/rmkdepend: Command not found
make: *** [cint/cint/src/g__cfunc.o] Error 127

I’m using
(gcc version 4.2.3 (Ubuntu 4.2.3-2ubuntu7))

Anyone know how to fix it ?

Thanks,

Dan

brun · June 27, 2008, 4:17pm

Before “make”, did you run “configure” ?
see: root.cern.ch/root/Install.html

Rene

pegasusmd · June 27, 2008, 4:19pm

yes.

./configure linux

Configuring for linux
Checking for GNU Make version >= 3.79.1 … ok
Checking for libX11 … /usr/lib
Checking for X11/Xlib.h … /usr/include
Checking for X11/Xft/Xft.h … /usr/include
Checking for X11/extensions/shape.h … /usr/include
Checking for libXpm … /usr/lib
Checking for libXft … /usr/lib
Checking for libXext … /usr/lib
Checking whether to build included libfreetype6 … yes
Checking whether to build included libftgl … yes
Checking whether to build included libpcre … yes
Checking whether to build included zlib … yes
Checking for GL/gl.h … /usr/include
Checking for libGL, or libMesaGL … /usr/lib
Checking for libGLU, or libMesaGLU … /usr/lib
Checking for mysql_config … not found
Checking for mysql.h … no
Checking for libmysqlclient_r, libmysqlclient, or mysqlclient … no
Checking for occi.h … no
Checking for libclntsh, or oci … no
Checking for libocci, or oraocci10 … no
Checking for libpq-fe.h … no
Checking for libpq … no
Checking for sql.h … no
Checking for libsqlod … no
Checking for sqlext.h … no
Checking for libiodbc, libodbc, or odbc32 … no
Checking for rfio_api.h … no
Checking for librfio, libshift, shiftmd, or shift … no
Checking for rfio_api.h … no
Checking for stager_api.h … no
Checking for libshift, shiftmd, or shift … no
Checking for gfal_api.h … no
Checking for libgfal … no
Checking for G4Navigator.hh … no
Checking for libG4navigation … no
Checking for CLHEP/Vector/Rotation.h … no
Checking for ApMon.h … no
Checking for libapmoncpp … no
Checking for fftw3.h … /usr/local/include
Checking for libfftw3, or libfftw3-3 … /usr/local/lib
Checking for libPythia6 … no
Checking for Pythia.h … no
Checking for libpythia8 … no
Checking for dcap.h … no
Checking for libdcap … no
Checking for chirp_client.h … no
Checking for libchirp_client … no
Checking for libglite-api-wrapper … no
Checking for gapiUI.h … no
Checking for libgapiUI … no
Checking for jpeglib.h … no
Checking for png.h … no
Checking for tiffio.h … no
Checking for gif_lib.h … no
Checking for libjpeg … no
Checking for libtiff … no
Checking for libungif … no
Checking for libz … /usr/lib
Checking for libpng … no
Checking whether to build included libAfterImage … yes
Checking for ldap.h … no
Checking for libldap … no
Checking for Python.h … no
Checking for python2.5, libpython2.5, libpython, python, or Python … no
Checking for xml2-config … not found
Checking for libxml/tree.h … no
Checking for libxml2_a, or libxml2 … no
Checking whether to build xrootd … yes
Checking for libssl … no
Checking for t_server.h … no
Checking for libsrp … no
Checking for libgmp … no
Checking for libmisc … no
Checking for pwauth.h … no
Checking for krb5.h … no
Checking for libk5crypto … no
Checking whether we’re using MIT Kerberos … no
Checking for shadow passwords … yes
Checking for gsl/gsl_version.h … no
Checking for gsl-config … not found
Checking whether to build libMathMore … no
Checking whether to build libGenVector … yes
Checking whether to build CINT7 … no
Checking whether to build libCintex … yes
Checking whether to build libReflex … yes
Checking whether to build libRooFit … no
Checking whether to build libMinuit2 … no
Checking whether to build libUnuran … no
Checking whether to build libGdml … no
Checking whether to build libTable … no
Checking whether to build libMemStat … yes
Checking for Clarens support … no
Checking for PEAC support … no
Generating cint dictionaries.
Checking whether setresuid declared in /usr/include/unistd.h … yes
Writing config/Makefile.config … done
Writing config/Makefile.comp … done
Writing include/RConfigure.h … done
Writing include/RConfigOptions.h … done
Writing bin/root-config … done
Writing etc/system.rootrc … done
Writing etc/system.rootauthrc … done
Writing etc/system.rootdaemonrc … done
Writing etc/root.mimes … done
Writing etc/daemons/rootd.rc.d … done
Writing etc/daemons/rootd.xinetd … done
Writing etc/daemons/proofd.rc.d … done
Writing etc/daemons/proofd.xinetd … done
Writing etc/daemons/xrootd.rc.d … done
Writing etc/daemons/olbd.rc.d … done
Writing bin/memprobe … done
Writing build/misc/root-help.el … done
Writing macros/html.C … done
Writing bin/thisroot.sh … done
Writing bin/thisroot.csh … done
Writing bin/genreflex … done
Writing bin/genreflex-rootcint … done
Writing config.status … done

Enabled support for asimage, astiff, builtin_afterimage, builtin_ftgl, builtin_freetype, builtin_pcre, builtin_zlib, cintex, exceptions, fftw3, genvector, memstat, opengl, reflex, shadowpw, shared, xft, xrootd.

To build ROOT type:

make

pegasusmd · June 27, 2008, 10:39pm

I used ./configure
the result is

Configuring for linuxx8664gcc
Checking for GNU Make version >= 3.79.1 … ok
Checking for libX11 … /usr/lib64
Checking for X11/Xlib.h … /usr/include
Checking for X11/Xft/Xft.h … /usr/include
Checking for X11/extensions/shape.h … /usr/include
Checking for libXpm … /usr/lib64
Checking for libXft … /usr/lib64
Checking for libXext … /usr/lib64
Checking whether to build included libfreetype6 … yes
Checking whether to build included libftgl … yes
Checking whether to build included libpcre … yes
Checking whether to build included zlib … yes
Checking for GL/gl.h … /usr/include
Checking for libGL, or libMesaGL … /usr/lib64
Checking for libGLU, or libMesaGLU … /usr/lib64
Checking for mysql_config … not found
Checking for mysql.h … no
Checking for libmysqlclient_r, libmysqlclient, or mysqlclient … no
Checking for occi.h … no
Checking for libclntsh, or oci … no
Checking for libocci, or oraocci10 … no
Checking for libpq-fe.h … no
Checking for libpq … no
Checking for sql.h … no
Checking for libsqlod … no
Checking for sqlext.h … no
Checking for libiodbc, libodbc, or odbc32 … no
Checking for rfio_api.h … no
Checking for librfio, libshift, shiftmd, or shift … no
Checking for rfio_api.h … no
Checking for stager_api.h … no
Checking for libshift, shiftmd, or shift … no
Checking for gfal_api.h … no
Checking for libgfal … no
Checking for G4Navigator.hh … no
Checking for libG4navigation … no
Checking for CLHEP/Vector/Rotation.h … no
Checking for ApMon.h … no
Checking for libapmoncpp … no
Checking for fftw3.h … /usr/local/include
Checking for libfftw3, or libfftw3-3 … /usr/local/lib
Checking for libPythia6 … no
Checking for Pythia.h … no
Checking for libpythia8 … no
Checking for dcap.h … no
Checking for libdcap … no
Checking for chirp_client.h … no
Checking for libchirp_client … no
Checking for libglite-api-wrapper … no
Checking for gapiUI.h … no
Checking for libgapiUI … no
Checking for jpeglib.h … no
Checking for png.h … no
Checking for tiffio.h … no
Checking for gif_lib.h … no
Checking for libjpeg … no
Checking for libtiff … no
Checking for libungif … no
Checking for libz … /usr/lib64
Checking for libpng … no
Checking whether to build included libAfterImage … yes
Checking for ldap.h … no
Checking for libldap … no
Checking for Python.h … no
Checking for python2.5, libpython2.5, libpython, python, or Python … no
Checking for xml2-config … not found
Checking for libxml/tree.h … no
Checking for libxml2_a, or libxml2 … no
Checking whether to build xrootd … yes
Checking for libssl … no
Checking for t_server.h … no
Checking for libsrp … no
Checking for libgmp … no
Checking for libmisc … no
Checking for pwauth.h … no
Checking for krb5.h … no
Checking for libk5crypto … no
Checking whether we’re using MIT Kerberos … no
Checking for shadow passwords … yes
Checking for gsl/gsl_version.h … no
Checking for gsl-config … not found
Checking whether to build libMathMore … no
Checking whether to build libGenVector … yes
Checking whether to build CINT7 … no
Checking whether to build libCintex … yes
Checking whether to build libReflex … yes
Checking whether to build libRooFit … no
Checking whether to build libMinuit2 … no
Checking whether to build libUnuran … no
Checking whether to build libGdml … no
Checking whether to build libTable … no
Checking whether to build libMemStat … yes
Checking for Clarens support … no
Checking for PEAC support … no
Generating cint dictionaries.
Checking whether setresuid declared in /usr/include/unistd.h … yes
Writing config/Makefile.config … done
Writing config/Makefile.comp … done
Writing include/RConfigure.h … done
Writing include/RConfigOptions.h … done
Writing bin/root-config … done
Writing etc/system.rootrc … done
Writing etc/system.rootauthrc … done
Writing etc/system.rootdaemonrc … done
Writing etc/root.mimes … done
Writing etc/daemons/rootd.rc.d … done
Writing etc/daemons/rootd.xinetd … done
Writing etc/daemons/proofd.rc.d … done
Writing etc/daemons/proofd.xinetd … done
Writing etc/daemons/xrootd.rc.d … done
Writing etc/daemons/olbd.rc.d … done
Writing bin/memprobe … done
Writing build/misc/root-help.el … done
Writing macros/html.C … done
Writing bin/thisroot.sh … done
Writing bin/thisroot.csh … done
Writing bin/genreflex … done
Writing bin/genreflex-rootcint … done
Writing config.status … done

Enabled support for asimage, astiff, builtin_afterimage, builtin_ftgl, builtin_freetype, builtin_pcre, builtin_zlib, cintex, exceptions, fftw3, genvector, memstat, opengl, reflex, shadowpw, shared, xft, xrootd.

To build ROOT type:

make

after using make

g++ -m64 -O2 -o bin/rmkdepend build/rmkdepend/cppsetup.o build/rmkdepend/ifparser.o build/rmkdepend/include.o build/rmkdepend/main.o build/rmkdepend/parse.o build/rmkdepend/pr.o build/rmkdepend/mainroot.o
collect2: ld terminated with signal 11 [Segmentation fault]
/usr/bin/ld: i386 architecture of input file build/rmkdepend/cppsetup.o' is incompatible with i386:x86-64 output /usr/bin/ld: i386 architecture of input filebuild/rmkdepend/ifparser.o’ is incompatible with i386:x86-64 output
/usr/bin/ld: i386 architecture of input file build/rmkdepend/include.o' is incompatible with i386:x86-64 output /usr/bin/ld: i386 architecture of input filebuild/rmkdepend/main.o’ is incompatible with i386:x86-64 output
/usr/bin/ld: i386 architecture of input file build/rmkdepend/parse.o' is incompatible with i386:x86-64 output /usr/bin/ld: i386 architecture of input filebuild/rmkdepend/pr.o’ is incompatible with i386:x86-64 output
/usr/bin/ld: i386 architecture of input file build/rmkdepend/mainroot.o' is incompatible with i386:x86-64 output build/rmkdepend/mainroot.o: In functionROOT_flush()’:
mainroot.cxx:(.text+0x147): undefined reference to std::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_mutate(unsigned int, unsigned int, unsigned int)' mainroot.cxx:(.text+0x172): undefined reference tostd::basic_string<char, std::char_traits, std::allocator >::_M_mutate(unsigned int, unsigned int, unsigned int)'
build/rmkdepend/mainroot.o: In function ROOT_adddep': mainroot.cxx:(.text+0x2fd): undefined reference tostd::basic_string<char, std::char_traits, std::allocator >::append(char const*, unsigned int)'
mainroot.cxx:(.text+0x388): undefined reference to std::basic_string<char, std::char_traits<char>, std::allocator<char> >::assign(char const*, unsigned int)' mainroot.cxx:(.text+0x3ac): undefined reference tostd::basic_string<char, std::char_traits, std::allocator >::assign(char const*, unsigned int)'
build/rmkdepend/mainroot.o: In function main': mainroot.cxx:(.text+0x638): undefined reference tostd::basic_string<char, std::char_traits, std::allocator >::find(char, unsigned int) const’
mainroot.cxx:(.text+0x680): undefined reference to std::basic_string<char, std::char_traits<char>, std::allocator<char> >::basic_string(std::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, unsigned int, unsigned int)' mainroot.cxx:(.text+0x6ab): undefined reference tostd::basic_string<char, std::char_traits, std::allocator >::_M_mutate(unsigned int, unsigned int, unsigned int)'
bin/rmkdepend -R -fcint/cint/src/g__cfunc.d -Y -w 1000 – -pipe -m64 -Wall -W -fPIC -Iinclude -DG__REGEXP -DG__UNIX -DG__SHAREDLIB -DG__OSFDLL -DG__ROOT -DG__REDIRECTIO -DG__STD_EXCEPTION -DG__64BIT -DG__HAVE_CONFIG -DG__NOMAKEINFO -DG__CINTBODY -Icint/cint/inc -Icint/cint/src -Icint/cint/src/dict -pthread -I. – cint/cint/src/g__cfunc.c
make: bin/rmkdepend: Command not found
make: *** [cint/cint/src/g__cfunc.o] Error 127

pcanal · June 28, 2008, 1:00am

g++ -m64 -O2 -o bin/rmkdepend build/rmkdepend/cppsetup.o build/rmkdepend/ifparser.o build/rmkdepend/include.o build/rmkdepend/main.o build/rmkdepend/parse.o build/rmkdepend/pr.o build/rmkdepend/mainroot.o collect2: ld terminated with signal 11 [Segmentation fault] /usr/bin/ld: i386 architecture of input file `build/rmkdepend/cppsetup.o' is incompatible with i386:x86-64 outputThis seems to indicate that you once build on a 32bit machine and now are buidling on a 64 bit machine.

Try again after doing gmake distcleanCheers,
Philippe

pegasusmd · June 28, 2008, 1:28am

Thanks!